KEGG   Babesia bovis: BBOV_IV000660
Entry
BBOV_IV000660     CDS       T01085                                 
Name
(RefSeq) uncharacterized protein
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
bbo  Babesia bovis
Pathway
bbo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bbo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    BBOV_IV000660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbo03019]
    BBOV_IV000660
   03041 Spliceosome [BR:bbo03041]
    BBOV_IV000660
Messenger RNA biogenesis [BR:bbo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     BBOV_IV000660
Spliceosome [BR:bbo03041]
 Complex B
  Other components
   Prp19-related factors
    BBOV_IV000660
 Complex C
    BBOV_IV000660
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N TPR_14 HAT_PRP39_C Suf TPR_8 TPR_12 TPR_2 Mad3_BUB1_I
Other DBs
NCBI-GeneID: 5477451
NCBI-ProteinID: XP_001609232
LinkDB
Position
4
AA seq 812 aa
MAAVTHRGHGDRNEASMDIYNTDAYLDSTYDRHKNEKLAILYDDRFHEEIGRNCNQCKPW
VEHIALLKSLRDPKAYRRVYCIRDICKLESVKSTETDSNEAAITINYDFKEDVITQRILR
TYERAVKHVPLSYKVWYGYIRDTIEAIQNPFYVHPAPYLRVNRLFERCIIHVYAAPAIYI
LYGQFLRTQNMISRTRRTYDRALLNLPITQHMMIWQQYIEFVKEVDLLPMGKAVLKRYIQ
LQPNTRESLYKMLKQHEHYDEACIVLCELLNDGKFVSESGKTQYDLWVELCELIRDYSQY
IRSVPIEAIIKEGIAKYSDQVAQLWIILADIYILRGQMLNARDVYEEALKSVTTVQDFST
IFDVYAKFLEKYAKQRKKLRGADLDVVMTVDRLENLINTRAMLMAKVKLKQNAHNVYNWL
HYVKLVENDINKTQEIFEQAVATVDPRKSVGRVTELWTSYASYFENHVDVDAADRIFEKA
VEGNYKFVDDLASVWCAWVEMHIRHNNLKRALELSRQAVDVRNKKEPNYVEQRLYRSVKL
WSLCLDLEQNLGTIATARATFDLMAELKVVTPQIALNFAMYLEEHKYFEAAFSAFEKCVA
LFKWPQLYYLYLPYLTKFVKRYRGTKLERTREIFDQCLHSGRESSTGDVPAQYVKYLYFL
YAHMEEEFGLVRRCLGILKDAAKCAAKEDQMTMIKLYIAKTAEFYGIVQTRNIYQECLEF
VDDEIARELCEMYIQMERGLGEIDRARAIFTYCAQLCDPMKYEKFWKDWREFEVLHGNEE
CFREMLRIKRSVQARFSKVHFNAEEIDVNTET
NT seq 2439 nt   +upstreamnt  +downstreamnt
atggccgccgtgacacatagaggccatggagatcgcaatgaagcctcaatggatatctat
aacaccgatgcgtaccttgattcgacctacgatcgccataaaaatgaaaagttggcaatt
ttgtatgatgataggtttcatgaagaaataggaaggaactgtaaccaatgtaaaccatgg
gtagagcatatagccttactgaaatcattgagggatcccaaagcatacagaagagtatac
tgcattagggatatttgcaaattggaaagcgtgaaatctacagagacagactctaatgaa
gctgctataacgataaattacgacttcaaggaagatgtaataacgcaacgaattctccgc
acgtatgaacgtgcagtaaagcatgtcccgctcagctacaaagtgtggtatggctatata
agggatactatagaagctatacaaaatccattttatgtacatccagcaccttatttacgg
gtcaatcgactgtttgagagatgtataatccatgtatatgctgcgcctgctatatatata
ctatatggccaattccttcgaacgcaaaacatgatctcacgaacgagacgaacatacgat
cgtgccctacttaatttgccaattacacaacatatgatgatatggcagcagtatatagag
tttgtaaaagaggtagacctactccctatgggcaaagctgtactgaaacgctacatacag
ctgcaacctaacacgagggaatcattgtacaagatgctaaagcaacatgaacattatgat
gaagcttgcattgttttgtgtgaacttttgaatgatggcaaatttgtatccgaaagcggg
aaaacacaatacgacctttgggtagaactgtgtgagctgatccgagattattcgcaatat
atacgaagtgtacctatcgaagccattataaaagaaggtatagcgaaatatagtgaccaa
gtagcccaattgtggattatattggccgatatatatatcctcagaggacaaatgctcaat
gcaagagacgtttatgaggaagcactcaaatctgtcactacagtgcaggatttctctacc
atctttgatgtttacgctaaatttcttgaaaagtatgcgaagcaacgcaagaaactccga
ggtgctgatctggatgtagtcatgactgtagatagattagaaaatcttatcaacactcga
gctatgctaatggcaaaagtaaagttaaagcaaaatgcacacaacgtgtataattggctg
cactatgtgaaacttgtagaaaatgacatcaacaagacacaagaaatattcgagcaggca
gttgccacagtggatcccaggaaatcagtgggtagggtcactgaattatggacgtcgtac
gcttcgtatttcgaaaatcatgtagatgttgatgcagctgatcgtatctttgaaaaggca
gttgaaggaaattacaagttcgttgatgatctcgcctcagtatggtgtgcctgggtagag
atgcatataagacataacaaccttaagcgtgcattagagctatctaggcaagctgtagac
gtgagaaataaaaaagaaccaaattatgtcgaacaaaggttgtatagatcagtgaaactc
tggagtctttgtcttgacctggagcaaaacctaggtacaatagctacagcaagggctact
ttcgatctgatggcagaacttaaagtggtaacaccacagatcgcgctaaactttgcaatg
tatctcgaggaacacaaatacttcgaagcagcattcagtgcatttgaaaagtgtgttgca
ctcttcaaatggccacaactttactacctctaccttccatatctaactaaatttgttaaa
aggtaccgtggaactaaattggaacgcacacgagaaatattcgatcaatgtctacactca
ggtcgggagtcgagtacaggtgatgtacctgctcaatacgtaaaatatctgtacttcctt
tatgcacatatggaagaagaattcggtttagtaaggcgctgtctgggcatactcaaggac
gcagctaaatgcgccgctaaagaagaccagatgactatgattaaactttatatcgcaaag
actgcagaattttacggaatagtacaaacacgtaacatttatcaagaatgcctggaattt
gtagacgatgaaatcgcacgagaactatgtgagatgtacattcagatggaacgtggactt
ggagaaatagatagagcacgtgctatctttacctactgtgcccagctctgcgaccctatg
aaatatgaaaagttctggaaagattggcgtgaatttgaagtgctgcatggcaacgaagag
tgtttcagggagatgctgcgcatcaagcgaagtgtacaagccagattttctaaagttcac
ttcaacgctgaggaaattgatgtaaacacagaaacttag

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