Babesia bovis: BBOV_IV002210
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Entry
BBOV_IV002210 CDS
T01085
Name
(RefSeq) Replication factor C subunit family member
KO
K10755
replication factor C subunit 2/4
Organism
bbo
Babesia bovis
Pathway
bbo03030
DNA replication
bbo03410
Base excision repair
bbo03420
Nucleotide excision repair
bbo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBOV_IV002210
03410 Base excision repair
BBOV_IV002210
03420 Nucleotide excision repair
BBOV_IV002210
03430 Mismatch repair
BBOV_IV002210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbo03032
]
BBOV_IV002210
03036 Chromosome and associated proteins [BR:
bbo03036
]
BBOV_IV002210
03400 DNA repair and recombination proteins [BR:
bbo03400
]
BBOV_IV002210
DNA replication proteins [BR:
bbo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
BBOV_IV002210
DNA Replication Termination Factors
ELG1-RFC complex
BBOV_IV002210
Chromosome and associated proteins [BR:
bbo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
BBOV_IV002210
DNA repair and recombination proteins [BR:
bbo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
BBOV_IV002210
Check point factors
HRAD17(Rad24)-RFC complex
BBOV_IV002210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
AAA_16
RuvB_N
Mg_chelatase
Rad17
RCF1-5-like_lid
AAA_5
AAA_19
AAA_24
AAA_11
nSTAND3
Gp44_lid
AAA_25
TniB
AAA_7
MCM
AAA_assoc_2
Sigma54_activ_2
Viral_helicase1
bpMoxR
AAA_3
DNAX_ATPase_lid
AAA_18
RNA_helicase
SRP54
IstB_IS21
FtsK_SpoIIIE
AAA_30
DUF2385
AAA_28
Motif
Other DBs
NCBI-GeneID:
5477605
NCBI-ProteinID:
XP_001609386
LinkDB
All DBs
Position
4
Genome browser
AA seq
322 aa
AA seq
DB search
MSNDIWIEKYRPGILKDVIGNPEVTRRLEVIAREGNMPNLLLCGPPGTGKTTSILCLAHE
MLGNHFKNAVLELNASDDRGVDVVRGAIKNFAKKSVVLPPNKHKIIILDEVDSMTEAAQQ
ALRRIMEIYSKTTRFALACNQSTKIIEPIQSRCAVIRYEPLQDEMILTRLIHICKEENVQ
YTNDGMEALLFTANGDMRRAVNNLQNVSSGYNLITSQNVYKVCDVPSPELIRKLLQDCLD
GQWRPAHEKAEDLLALGHSPFDILMTVRSVLKTLKAPEHILCEFLKTISLSHMTMISGLS
SPLQLDKLIATLCKVSLIMRKS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgatatttggatcgaaaagtaccgccccggtatcttgaaggacgttatcggg
aatcccgaggtgacgcgtcgcctagaagtgatcgcaagggaagggaatatgcccaaccta
ttactctgtggtcctccaggcactgggaagacaacgtctatactctgcttggcccatgag
atgctgggaaaccatttcaagaatgcagttttagagctcaatgctagcgatgatagggga
gtggatgttgtacgtggagctatcaaaaactttgcgaaaaagtcagttgtattaccacca
aataagcacaaaataattatacttgatgaagtggattcgatgaccgaagctgcacagcag
gcactgaggcgtatcatggaaatatactctaaaacaacacgatttgcgctagcgtgcaat
caatcgactaaaatcatagaacccatccaaagccgttgcgccgttataagatatgagccc
ctgcaggatgaaatgatactcactcgactaattcacatttgtaaagaggaaaatgtacag
tatacaaacgatggcatggaagcattgctatttacagcaaatggtgacatgcgtcgtgcg
gttaacaacctgcaaaatgtatcctcaggatataatttgatcactagtcaaaatgtatac
aaggtctgcgatgtaccgtcaccagaactcattaggaaattactacaagattgcttggat
ggacaatggcgcccagctcatgaaaaagctgaagatttgttggccttaggccattcgcct
tttgatatcctcatgactgtccgaagcgtccttaagacattaaaggcaccagagcatata
ctttgtgaattccttaaaaccatatcattgtctcacatgacaatgatcagtggattatct
agcccgctacaattagacaaacttattgcaactctttgcaaagtttcacttataatgaga
aaaagctag
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