Babesia bovis: BBOV_IV002750
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Entry
BBOV_IV002750 CDS
T01085
Name
(RefSeq) eIF-4A-like DEAD family RNA helicase family protein
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
bbo
Babesia bovis
Pathway
bbo03013
Nucleocytoplasmic transport
bbo03015
mRNA surveillance pathway
bbo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BBOV_IV002750
09122 Translation
03013 Nucleocytoplasmic transport
BBOV_IV002750
03015 mRNA surveillance pathway
BBOV_IV002750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbo03019
]
BBOV_IV002750
03041 Spliceosome [BR:
bbo03041
]
BBOV_IV002750
Enzymes [BR:
bbo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BBOV_IV002750
Messenger RNA biogenesis [BR:
bbo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
BBOV_IV002750
Spliceosome [BR:
bbo03041
]
Complex C
Other components
EJC/TREX
BBOV_IV002750
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
BBOV_IV002750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
5477659
NCBI-ProteinID:
XP_051623061
LinkDB
All DBs
Position
4
Genome browser
AA seq
460 aa
AA seq
DB search
MAKGKTPVPAEDLVDYEEQEAGQVTSHNVIKSGASSKVGREDGTMGRGSYVAIHASGFRD
FFLKPEILRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSVLQQLDV
QEDGTLAGGVKRDAGGEAVAPSADRVACLGISHTRELAYQIKNEFDRFSKYMNGVRCEVV
YGGVPISRDIEMLKDPEKCPHILVGTPGRLLALIKGKHLNMDGIRHFVLDECDKCLEKLD
MRADVQSIFMSTPKKKQVMFFSATMNNDVRDVCKRFVRSPVEVFVDDESKLTLHGLLQYY
VKLSESDKNRKLNDLLDNLEFNQVIIFVKSVSRAQTLDNLLNECNFPSIAIHAGLDQDER
IARYTQFKNFDKRIMVSTDLFGRGIDVERVNIVINYDMPDSTDSYLHRVGRAGRFGTKGL
AITFVATEADSTALADVQKRFEVDIPEMPESIDTSLYLNQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagggtaagactcccgtcccagcggaggacttggtagattacgaggagcaggag
gcaggccaggtaacttctcacaatgtcattaagtccggtgcttcatctaaggttggccgt
gaagatggtactatgggtcgtggtagttacgtcgctatccacgctagtggatttcgtgac
tttttcctgaagccggagattttacgtgctataggtgacgctggttttgagcatccttct
gaggtgcaacacgagacaattcctcatgccattactggtgttgacattttatgtcaggct
aagtctggtatgggtaagacagctgtatttgtattgtctgttcttcagcagcttgacgtg
caggaggacggtactcttgccggtggtgttaagcgtgatgctggtggtgaggctgttgct
ccttctgctgaccgtgttgcttgtttaggcataagtcacactcgtgagcttgcttatcag
attaagaacgagtttgaccgtttttcaaagtacatgaacggtgttcgttgtgaggtggtt
tatggcggtgttcctatatctcgtgacattgagatgttgaaggaccctgagaagtgtcct
cacattctcgttggcactcctggtcgtttattagctcttattaagggtaagcaccttaat
atggatggcattcgtcattttgtccttgatgaatgtgacaagtgtcttgagaagcttgac
atgcgtgctgatgtacaatctatatttatgtcaactcctaagaagaagcaggtgatgttt
ttctctgccactatgaacaatgacgtccgtgacgtttgcaagcgtttcgtacgatctcct
gttgaggtatttgttgacgacgagtctaagcttactttacatggtctccttcagtattac
gtcaagctttctgagagcgacaagaatcgcaagcttaatgatcttcttgacaaccttgag
tttaaccaggtgattattttcgtgaaatcagtgtctcgggctcaaactctggacaactta
cttaatgagtgcaactttccttcgattgctattcatgctggtcttgaccaggatgagcgt
attgctcgttacactcagttcaagaactttgacaagcgtataatggtttcgactgattta
ttcggtcgtggcattgatgtagagcgcgtcaacattgtgataaactacgacatgcctgat
tctactgactcttatcttcatcgtgtgggtcgtgctggtcgttttggtaccaagggtttg
gccatcaccttcgttgctacggaggctgattccactgctttagcagatgtgcaaaagagg
ttcgaggtggacatcccagagatgccggagtcaattgacacttccctctatttgaatcaa
taa
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