Babesia bovis: BBOV_IV005010
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Entry
BBOV_IV005010 CDS
T01085
Name
(RefSeq) CPSF A subunit region family protein
KO
K10610
DNA damage-binding protein 1
Organism
bbo
Babesia bovis
Pathway
bbo03420
Nucleotide excision repair
bbo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bbo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
BBOV_IV005010
09124 Replication and repair
03420 Nucleotide excision repair
BBOV_IV005010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbo04121
]
BBOV_IV005010
03400 DNA repair and recombination proteins [BR:
bbo03400
]
BBOV_IV005010
Ubiquitin system [BR:
bbo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
BBOV_IV005010
DNA repair and recombination proteins [BR:
bbo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
BBOV_IV005010
TCR (transcription coupled repair) factors
Cul4-CSA complex
BBOV_IV005010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
5478664
NCBI-ProteinID:
XP_001610430
UniProt:
A7AQP3
LinkDB
All DBs
Position
4
Genome browser
AA seq
1450 aa
AA seq
DB search
MMNRIYTYFVTSAPGGATRNALRCKLAENSDRDYLVCLKKSSIDVYSLEQIGADDGDCRD
SNAPVLTATVEGHTILVDILEFRPPGATQSHLLVLTSNFLLILLTFDAKHSRFVSRPLVS
LQEPGAPNIESEVILRVDPEYYLIFFHGQKKTIKCVILDRYDYFNINYVVTMRTGQTMFH
DIAFYDICEKTAGPSSHKSSSTVQRAMNVAALSAPCRTDIHQGKYVLECKMLLLASSGIT
DDSSDSERSDLCYCGLRLFFEIERFDGRRHFTSYGCLPLFPEVVVLPRHLTKFMPLKLNP
GPRHSDSLMLLGSQGLGFVSFRDPKNVRQFHVDISVGHISCYCSVVDNWRYIIGDDTGAL
YLLELIGSSMSVSSALKRRAGASQSSAPTSKAVAATTCNGIVDIVTTKLGVYSPPSALVM
LNPNLVYIAATVGNCRTVRLSGIDDRHGIGMQLTPMDCDNPRRVDAIDDSSRILSINDAT
TQDRLQANDACSDPTEEEYHTMDEADDEGFQDPWSPKTWETWKQTNLGPIVDFTFGPQSD
SGAIPILACCGYGAEGRVCSITNGVAIDVMASSPASGVLYTTALPLFNEANNNFMICTSY
FNRTRFYKVVVPPAPKRDPSKTAIDFVKQPLWVVTSMDPSSHRFVEHMRTLLMVPYGTQM
VLQVTTNGISLVNYKSVAIPRVDHSLNDICKIAGIAVGSGVMPISIVSCHLCDSGVFIGL
SNHVFLILDVSNGVKILHKSVLPKQVSSTAYLSGGDFKTKRRTGLIAVSTWEDTEISLIS
PEGLQMLHTTKVPCGYGVAIRAVRFGVVGDVALVFAALSDGTLCVYRLKFGDCDKDGLGT
NTQLSMVMENVIKVSNGPIGLDAISMHASVPGSGGTNLLKNRIVTTGDNPMLIYANRGKL
EYVPVNVPRIDTVTSFNFVEKNPQGVSLVFTDKKSIHIGHMDTALQLHVETICSGRSFET
ICYHDESDLVVVGCNGELIADCDMPSISDSSVTHNDSSVFRCMDVASCGTIPGVYVLKSC
VKFIHLGTKEVVHTLNMPQRHVITSMCTVKFDGPKTLIALGSSLIQDKDGVPSQGYIFLV
DVIKSDAHKWNVVFLRTLNFIDKGVTQMTPCINQLVVALNETVAVLSLVRGADPEPSDTL
RSYKMEVLHESDESYGQYTLVTRAEYKSCSYVVSLDAYQDVIVIGDLMNSMRMLQWQGTE
LREVCKDFNSVYCTAAAAIDQTSCVVADSSGNFYVFAKRQVVTNDAEAIKAEDVGLFHHG
ELINRIRRNPKVQSRVALLNGNSDHDMPEFPMKTYCNRPFCCVQGDVSAAISHSSCNDLV
RGLAKPNKFWKYGFKTILTCVTTSGSLLQLCIFDDTKLFCRLAFVEEGINRIQPQAGNIS
NEHWRSFKNRWMMCAAKGFIDGDAIESYNRLDTSLKSEVYNMVSKTDAHGLFYSPELLSL
EVEHIQRLRQ
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaccgtatttacacatactttgttacctcggcgcccggaggggccacccggaac
gctctgcgatgcaagcttgcagagaattcagatagggactacttggtgtgtctcaagaag
tcaagtatagacgtctactcgctggagcagattggcgctgacgatggcgactgccgggat
tccaatgcgccagtacttactgctactgtcgaagggcacactatcctggtcgatatacta
gagttcaggcctcctggagctactcagagccatttgctagtgcttacctcgaatttcctg
ctgattctactaacctttgatgcgaagcactctcgctttgtctctaggccgttagtttca
ctgcaagagcctggagcgccgaatattgaatccgaggttatactccgcgttgatcctgaa
tactatcttatattttttcacggccagaagaagactataaagtgcgtgatacttgatcgt
tacgattattttaacataaactatgtagtcactatgcgcactggccagactatgttccat
gatatagccttttacgacatttgtgagaagactgctggcccaagctcccataagagttcg
tcaactgtccagcgtgcaatgaatgtagccgctctttcagcaccttgtcgaactgacata
caccagggaaagtacgtccttgagtgtaagatgctactgctggcttccagtggtatcact
gatgattccagcgactcggaacgcagtgacctgtgctactgcggattaaggctgtttttc
gagattgagcgatttgacggccggcgccactttacctcatatgggtgcctgccattattc
cccgaagtcgtagttttgccacggcacctcaccaagttcatgcctctgaagcttaatccc
ggtcccaggcacagtgacagtttaatgttactaggttcccagggactgggatttgtatca
ttccgtgaccctaagaacgtgaggcagttccatgttgatatatcggtaggtcacataagc
tgctactgtagcgtggttgacaactggcggtatattatcggtgacgacacgggtgccttg
tacctactggagctcataggctccagcatgtcagtcagcagcgccttaaagcgcagagcc
ggtgcgtcgcagtcatcagcaccgacgtccaaggcagtggcggcaaccacttgcaacggg
atagtggacattgtgaccacgaaactcggtgtctactcgccaccctcggccctggtcatg
cttaatcctaacctggtgtacatagctgcaacggtaggtaattgcagaactgtccgcttg
tcggggattgacgatcgacatggcattggtatgcagctgaccccaatggactgtgataac
ccaagacgcgtggatgcgatagacgatagttccaggatactgtctatcaatgatgcaact
acccaagacagattacaggctaacgacgcatgtagtgatcccacggaggaagaataccat
accatggacgaggctgatgatgaagggttccaggacccatggtcgccgaagacatgggaa
acctggaagcaaactaaccttggacctatagtggactttacatttggtccacagagtgat
agcggcgcaatacccatactggcatgttgtggatacggtgccgaaggacgcgtttgcagt
ataaccaacggtgtcgctatagatgtaatggcatcgagcccggcaagtggcgttttgtac
actacggcgctaccgctgtttaatgaagcgaataacaactttatgatatgtaccagctat
ttcaatcgcacccggttctacaaggtagttgtgccgccagccccaaagagggatcccagc
aagactgccattgactttgtgaagcagccgctatgggtagtaacgtctatggaccctagt
tcccacagattcgtggagcatatgcgcacgctgttgatggtgccttatggcacgcaaatg
gtattgcaggtaactacaaatgggatatccctggtaaattacaaaagcgtcgcgattccc
cgggttgatcattcgctaaatgatatatgcaagatagctgggatagctgttggcagtggc
gttatgcctatatctatagtcagctgccacctttgcgattctggagtgttcatagggttg
tcaaatcacgtattcctcatcttggatgtatccaacggcgtgaagatattacacaaaagt
gtgctcccaaaacaagtgtcttctacagcatacctcagcgggggtgatttcaagactaaa
aggcgaacgggattaatagccgtgtcaacatgggaggatactgaaatatccttgatatca
cccgaggggctccagatgctgcatacgacaaaagtaccctgcggatatggtgtggcaata
cgggcagtgcgctttggtgttgtcggcgatgtagcactggtttttgctgcactctccgac
ggtaccctgtgcgtgtaccgcttgaagtttggcgactgcgataaggatggtttgggtaca
aatacccaattgtcaatggtcatggaaaatgtaatcaaagtgagtaatgggcccataggg
ctggatgccatatctatgcacgcttcagtgcccggttctggtgggactaacctgcttaaa
aatcgcatagtcaccactggtgataacccaatgcttatttatgccaatcgtggtaagctt
gaatacgtacccgttaacgtaccgcgtattgatactgtcacatctttcaactttgtggaa
aagaacccccaaggcgtgtcgctggtgtttacagacaagaagtccatccatataggccat
atggacactgctttacagctacatgttgagactatatgtagcggcaggtcgtttgagacc
atatgctaccatgacgaaagtgatctcgtggtagtaggttgcaacggtgagctcattgct
gattgtgatatgccgtcgatttctgattcatcggtcactcacaatgactctagtgttttc
cgatgcatggatgttgcttcctgtggtacaatcccaggtgtatacgttctgaagtcatgt
gtcaagttcatccacctgggtactaaggaggtggtgcataccctgaatatgccgcagcgt
catgtaatcaccagcatgtgcacagttaagttcgatggccccaagacgttgatagcgcta
ggttcatcattaatccaggataaagatggagtgccttctcaggggtacatattcctggtg
gatgtcataaaaagcgatgcccacaagtggaatgtggtattcctgagaactttaaacttc
atagataagggggtaacccaaatgacaccgtgcattaaccagttggttgtggcattgaat
gagactgtggcagtactctcattggtccgtggcgcggatccagaacccagtgatactttg
cgtagctacaagatggaggtgctacacgaatcagatgaatcatatggacagtacacttta
gtaacccgtgctgagtacaaatcgtgctcgtatgtagtatcgttggatgcataccaggat
gttatcgttataggtgatttgatgaactcgatgcgtatgctacagtggcagggtaccgag
ttacgcgaggtctgcaaggactttaacagtgtatattgcaccgcggcagccgcaatagat
cagacgtcctgcgttgtagcagatagctctggcaacttttacgtctttgctaagcggcag
gtagtgactaacgacgccgaagctataaaagcagaggacgttgggctgttccaccatgga
gagcttattaatcgtatacgccgtaaccctaaggtgcagtccagagtggccctgctaaac
ggtaactccgaccatgacatgccagaattccccatgaaaacctattgcaacaggccattt
tgttgcgtgcagggagatgtttcagccgctatatcgcacagttcctgcaatgacctggta
cgtggcctagccaaaccaaacaagttctggaagtatggtttcaagactatactgacatgc
gtcactacatcagggtcactgctacagctgtgtatattcgacgacactaagttattctgc
agattggcgtttgttgaggagggtataaaccgtatacaacctcaagctggtaatatttca
aacgaacattggcgctcgttcaagaatcgctggatgatgtgcgccgctaaggggttcatt
gatggcgacgccatcgaaagttacaacagactggataccagtctgaagtcagaggtatac
aacatggtatccaagactgatgcccatgggctgttctactccccagagctgctttccctg
gaggtggagcacatccaaaggctgcggcaatga
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