Brevibacillus borstelensis: RFB14_00880
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Entry
RFB14_00880 CDS
T09438
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bbor
Brevibacillus borstelensis
Pathway
bbor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RFB14_00880 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbor03019
]
RFB14_00880 (recQ)
03400 DNA repair and recombination proteins [BR:
bbor03400
]
RFB14_00880 (recQ)
Enzymes [BR:
bbor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RFB14_00880 (recQ)
Messenger RNA biogenesis [BR:
bbor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RFB14_00880 (recQ)
DNA repair and recombination proteins [BR:
bbor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RFB14_00880 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
DUF7132
Motif
Other DBs
NCBI-ProteinID:
WNF06035
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All DBs
Position
197497..199287
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AA seq
596 aa
AA seq
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MLHQAEEVLQNYFGYTAFREGQKTIVASLLSGHDTLGIMPTGGGKSICYQVPALLFDGVT
IVISPLISLMKDQVDALVSMGIAAAEINSTLDSSEVRDRMRKAREGTYRLLYVAPERLET
ESFLSLASELPISMVAVDEAHCVSQWGHDFRPSYLAISRFIQALPVRPVVAALTATATPE
VTEDIQRLLTLQDERVYISGFGRDNLHLSVRKGEDRRRFILDYLEANRQQSGIVYASTRK
DVDALYEFLDGRGFSVTRYHAGLSEAERARNQDAFLFDDAKVMIATNAFGMGIDKSNVRY
VIHYSMPKNLEAYYQEAGRAGRDGEPSECILLFHSQDIQTQMFFIEQNPLGEERKEHEYK
KLYAMIDYCRTPRCLQQYIVRYFGDHSAPECGKCGNCTNDAELADVTLEAQKVFSCVKRM
RERFGASLVAQVLKGSRNKKVLQFGFEKLPTYGLMSDYTEKQIVDLIELFIAEGYLRVTE
SKYPTLALGDRALPVLRGEEQVWQKVFIRPVKREEDDELFERLRQLRKEISQKEGVPPYV
IFHDSTLKELSQLCPTDRETMLTVKGVGAAKFEKYGQAFLDCLQDYAQAKAGVGSQ
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
ttgttgcaccaagctgaagaagtcttgcaaaactattttggatacactgcctttcgcgaa
ggacaaaaaacgattgtcgcgagtcttctttccggccacgacactttgggcatcatgccg
accgggggcggaaagtcgatctgttatcaggtgccggcccttttgtttgacggagtcacg
attgtcatttccccgttgatttctttgatgaaggaccaggtggacgcgctggtcagcatg
gggatcgcggctgcggagatcaacagcacgctggattcctctgaggtgcgggacaggatg
agaaaagcccgggaagggacgtacaggctgctgtacgtagccccggagcgtttggaaacg
gagagctttttatcccttgcaagcgagctgccgatctccatggtagcggtcgatgaggcg
cattgcgtctcccaatgggggcatgattttcgcccgagctatctcgcgatttcccgcttc
atccaagcgctgcccgtccggcctgtagtcgctgccctgacggctacggctacgcccgag
gtcaccgaggacatccaaagactgctcacgctgcaggatgagcgcgtctacatcagcggg
tttggccgggacaacctccacctttccgtgcgaaagggggaagacaggcgccggtttatc
ctcgattacctggaggcaaaccggcagcaatccgggatcgtctacgcatctacgcgcaaa
gacgtcgatgcgctgtatgagttcctcgatgggcggggcttttccgtcaccaggtaccac
gccggtctgtccgaggcagaaagggcccgcaatcaggacgcgtttctcttcgacgacgcc
aaggtcatgatcgccaccaacgcatttggcatgggcatcgacaagtccaatgtccggtac
gtcattcactacagcatgccgaaaaacctggaggcctactaccaggaggcgggccgcgcc
ggacgggacggagagccgagcgaatgcatcctgctctttcattcgcaggatatccagacg
cagatgttcttcatcgagcagaatccgctcggggaagagagaaaagagcacgaatacaaa
aagctgtacgccatgatcgattactgccggacgccgcgctgcctgcagcagtacatcgta
aggtacttcggcgaccactcggcgccggagtgcggcaaatgcggcaactgcaccaatgac
gctgagctggccgacgtcacgctggaggcccagaaggtcttttcctgcgtcaagcggatg
cgcgagcgtttcggggcttcactcgtcgcccaggtactgaagggctcccgcaacaaaaag
gtgctgcaattcggctttgaaaagctgccgacctacggcctgatgagcgattacacggaa
aagcagatcgtcgacctgatcgagctgtttatcgccgagggctacctgcgcgtgacggaa
agcaagtacccgaccctcgccctgggcgacagggcactgcctgtgctcagaggggaagag
caggtgtggcaaaaggtgttcatccgtccggtcaagcgtgaggaggacgacgagctgttc
gagcgcctgcgacagcttcgcaaagaaatctcgcagaaggaaggcgtgccgccgtatgtc
attttccacgacagcaccttaaaggagctgagccagctttgtccgactgatagagagacg
atgctgaccgtgaaaggggttggggcggccaagtttgagaagtacggccaggcttttttg
gattgtctgcaggattatgcgcaagcaaaggcgggagtaggttcgcaataa
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