Brevibacillus borstelensis: RFB14_01020
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Entry
RFB14_01020 CDS
T09438
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bbor
Brevibacillus borstelensis
Pathway
bbor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RFB14_01020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbor03019
]
RFB14_01020
03009 Ribosome biogenesis [BR:
bbor03009
]
RFB14_01020
Enzymes [BR:
bbor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RFB14_01020
Messenger RNA biogenesis [BR:
bbor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RFB14_01020
Ribosome biogenesis [BR:
bbor03009
]
Prokaryotic type
rRNA helicases
RFB14_01020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
AAA_19
SWI2_SNF2
Flavi_DEAD
UvrA_inter
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WNF08324
LinkDB
All DBs
Position
237928..239373
Genome browser
AA seq
481 aa
AA seq
DB search
MGFEEATPIQAETIPTVLQGQDLIGQAQTGTGKTAAFGIPLVERVDSEKEQIQAVVLTPT
RELAVQVAEELNKIAQHKKVTALPIYGGQDIQRQIRALKKRPEIIVATPGRFMDHMNRKT
IRLHGVEMVVLDEADEMLNMGFVDDIKAILQEMPEERQTLLFSATMPRPIQEIARNFMKN
PVTISIKAKELTVPNIQQQYMEVPEKQKFDVLCRLLDIHSPELAIIFGRTKRRVDELAEA
LNKRGYGAEGIHGDLNQAKRDSVLRKFKEGTIEVLVATDVAARGLDISGVTHVYNFDIPQ
DSESYVHRIGRTGRAGKTGLAITLVTPRETDHLRYIEKATNRKMERKPVPTLAEAIEGQQ
RLTVDKLMETTGSGELSMYKSLAEQLLDEVDSVTLVAAALKLLTKEPDTTPVRLTEEAPL
RVGKRKMMDQSRGRGPRTGAKRSGGGGGGFSRAGHGKGRPAQHNRNRRDWDRDRDRDRNR
D
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggggtttgaagaggcgacaccgattcaggcggagacgatccccaccgtcctgcaggga
caggatttaatcgggcaggcacaaaccggtacagggaaaaccgctgctttcggcatcccg
ctcgtggaaagagtggatagcgaaaaggaacagatccaggcggtagtcctcactcccacc
cgggaactggctgttcaggtagctgaagaactgaacaagattgcccagcacaaaaaagtg
actgctctgccgatctacggcggacaggatatccagcgccagatcagggcattgaaaaag
cgccctgaaattatcgttgctactccgggccggttcatggaccatatgaaccgcaagacg
attcgtctgcacggtgtggaaatggtcgtactggatgaagcggatgaaatgctcaacatg
ggctttgtcgacgacatcaaggctatcttgcaagagatgccggaagagcggcaaaccctg
ctgttctcggcgacgatgccgcgcccgatccaggaaattgcccgcaatttcatgaaaaac
cctgttaccatttcgatcaaggcgaaggaattgaccgttcccaatatccagcagcagtat
atggaagtgccggagaagcagaaatttgatgttctgtgccgtctcctggacatccattcg
cctgagctggcgattatcttcggacggaccaaacgccgcgtagacgagctggcagaggct
ctgaacaagcgcggatacggtgcggaaggcatccacggcgacttgaatcaggcaaaacgc
gacagcgtgcttcgcaagttcaaggaaggcacgatcgaagtgctggtcgctaccgatgtg
gccgctcgcggattggatatcagcggggttacccacgtgtacaactttgacattccgcag
gattcagagagctatgtccaccgcatcggcagaaccgggcgtgcgggtaaaacaggcttg
gcgattacgctggtcactccgagagaaacagaccacctgcgttatatcgagaaggctacc
aaccgcaagatggaaagaaagcctgttccgacgcttgccgaagcgatcgagggacaacag
cgtctgacagtggacaaactgatggagacgacaggcagcggcgagctgagcatgtacaag
tcgctggctgagcagcttttggatgaggtcgattccgtaacgttggtagccgctgcattg
aagctgcttaccaaggaacccgacaccactcctgtccgtttgacagaggaagcccctctg
cgcgtaggcaagagaaaaatgatggatcagtccagaggcagaggccctcgtaccggagcc
aagcggagcggcggaggcggaggcggcttctcgcgagcggggcatggaaaaggaagaccg
gcccaacacaacaggaacagaagagactgggatcgggatcgcgaccgtgaccgcaataga
gactag
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