Brevibacillus borstelensis: RFB14_01405
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Entry
RFB14_01405 CDS
T09438
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bbor
Brevibacillus borstelensis
Pathway
bbor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RFB14_01405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbor03400
]
RFB14_01405
Enzymes [BR:
bbor01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RFB14_01405
DNA repair and recombination proteins [BR:
bbor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RFB14_01405
Prokaryotic type
RFB14_01405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WNF06128
LinkDB
All DBs
Position
327545..328252
Genome browser
AA seq
235 aa
AA seq
DB search
MSILRNDWAEILADEFEKPYYIQLREFLKTEYQSQAIYPDMYDIFNALHLTPYREAKVVI
LGQDPYHGPGQAHGLSFSVKPGVATPPSLQNIYKELQSDLGCTIPQHGYLVNWAKQGVLL
LNTVLTVRGGNPNSHKGKGWEIFTDRVIAALNDRETPLVFILWGRHAQEKASFIDTNKHF
IISSPHPSPFSANRGFFGSRPFSRTNQFLRSQGMKEIDWQLPLQAELEEATAARS
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgtctattttgcggaacgattgggctgagatattggcggacgagtttgaaaagccatac
tacatccagcttcgtgaatttttgaaaacagaataccagagccaggcaatctatcctgac
atgtacgatatattcaatgcgcttcacctcacaccatatcgggaagccaaggtcgtcatc
ctcggccaggacccgtatcacggtcctggtcaggcacatggactcagtttttctgtcaag
ccgggggtagcgacgccgccgtccttgcaaaatatttacaaggagcttcaaagcgacttg
ggctgtacgatcccgcagcacgggtatttggtcaattgggccaagcagggcgtgctgctg
ctcaacacggtgttgacggtgcgagggggaaaccccaactctcataaaggcaaaggctgg
gaaatctttacggaccgggtgatcgccgccttgaacgaccgggaaacgccgctggtgttt
attctgtggggacggcatgcgcaggaaaaggcgtcatttattgatacgaacaagcatttc
atcatttcgtctccgcatccaagcccgttttcggccaatcgcggcttctttggcagcagg
cccttttcgcggaccaaccagtttttgcgttcgcaggggatgaaggagatcgattggcag
cttccgttgcaggcggagctggaagaggcgactgcggctcggtcgtaa
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