Brevibacillus borstelensis: RFB14_02800
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Entry
RFB14_02800 CDS
T09438
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bbor
Brevibacillus borstelensis
Pathway
bbor02020
Two-component system
bbor02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bbor00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RFB14_02800 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RFB14_02800 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbor03021
]
RFB14_02800 (rpoN)
Transcription machinery [BR:
bbor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RFB14_02800 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Sigma70_r4_2
HTH_Crp_2
HTH_AsnC-type
Sigma70_r4
HTH_24
Xre-like-HTH
HTH_3
HTH_23
MarR
HTH_Tnp_ISL3
HTH_IclR
Phage_CII
HTH_28
MarR_2
HTH_38
SF3b1
Motif
Other DBs
NCBI-ProteinID:
WNF06387
LinkDB
All DBs
Position
630072..631448
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AA seq
458 aa
AA seq
DB search
MNMGLGLYQEQTLKLVMTPELRQAITILQYSAVDLVSYLQEQANENPVFELQEAVVELAP
AKMEKPLPEIDWKEIVGNRATGEYTAGKNESTYNPLDFVTQRSVTLYEHLERQLGYFKSF
TQPQRRIALFLIGNLDEKGYLEITLEEASQRLGADLEELEDVLTVLQHFDPAGVAARSLE
ECLLLQLRHMGKDDDHVVEIVTSHLQDLADCRYQRIADKVGCTVQEVQAIADLLRTLNPR
PGAAFSQVETRYVIPDVAVEKVGDEYIVLVNDVATPRLKINSFYEKMLSQQKSQEEAKQF
IHEKLNAAMWLAKSLEQRRLTLMRVTQAIVDMQRDFFDRGIHYLKPMTQKEIAERVGLHE
STISRATSNKYVQTPRGIFELKYFFTSALSTANGEATSSESVKRRIKALIEQEDRKQPLS
DQKLAEMLLQEGIEISRRTVAKYREEMLIPSSAKRKRF
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggggctggggctttatcaagaacagacactcaagcttgtgatgacaccggag
ctcagacaggccattacgattttacaatattcggccgtcgatctcgtctcgtatttgcag
gagcaagccaatgaaaatcccgtgttcgagctgcaggaagcggtggtggagctggcaccg
gcaaaaatggaaaagccgctgccggaaattgactggaaggaaattgtaggcaatcgggcg
acgggcgaatatacggcgggcaaaaatgaaagcacttacaatccgctggacttcgttacg
caacggtcggttacgctgtatgaacatttggagcgccagctcggctatttcaaaagcttt
acgcagccgcagcggagaatcgctctgtttttgatcggaaacctggacgaaaaaggctac
ctggaaattaccctggaggaggcgtcccagcgattgggcgccgatcttgaagagctggag
gacgtcctgactgttctgcagcatttcgatcctgccggcgtagccgcgagaagcctggaa
gaatgtctgcttctgcagctcagacacatggggaaggacgatgatcatgtcgttgagatc
gtcacctcgcacctccaggacctggctgactgccgctaccagcgcatcgccgacaaggtg
ggctgtacggtgcaggaggttcaggcgatagccgatctcctgcggacgctgaatccccgt
ccgggcgcagccttttcccaagtggagacgcggtatgtgattccggatgtagccgttgaa
aaggtgggcgacgaatacatcgtcctggtcaacgatgtggcaactcccagacttaaaatc
aacagcttttacgaaaaaatgctgagccagcaaaagagccaggaagaggcgaagcagttt
atccacgaaaagctgaacgccgccatgtggctggcaaaaagtctggagcagcgccgtctc
accctgatgcgggtgacgcaggccatcgtcgacatgcagcgggatttctttgaccgcggc
attcattatttgaagccgatgacgcaaaaggaaatcgccgagcgggtagggctgcacgaa
tcgacgatcagccgggcgacgagcaacaagtacgtacagacgccgcgaggcattttcgag
ctgaaatacttttttacctcggcgctttctacagcgaacggagaagcgacttcttcggaa
agcgtaaaacgcaggatcaaggcgctgatcgagcaggaagaccggaagcagccgctgtcc
gatcagaagctggccgaaatgctgctgcaggagggaattgaaatttcccgccgcacagta
gcgaagtatcgcgaggagatgctgatcccatcctcagccaaacgaaagaggttctaa
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