Brevibacillus borstelensis: RFB14_11075
Help
Entry
RFB14_11075 CDS
T09438
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bbor
Brevibacillus borstelensis
Brite
KEGG Orthology (KO) [BR:
bbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbor03032
]
RFB14_11075 (topA)
03400 DNA repair and recombination proteins [BR:
bbor03400
]
RFB14_11075 (topA)
Enzymes [BR:
bbor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RFB14_11075 (topA)
DNA replication proteins [BR:
bbor03032
]
Prokaryotic type
DNA Topoisomerases
RFB14_11075 (topA)
DNA repair and recombination proteins [BR:
bbor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RFB14_11075 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
WNF07897
LinkDB
All DBs
Position
2310120..2312198
Genome browser
AA seq
692 aa
AA seq
DB search
MADTLVIVESPAKAKTIGKYLGSKYIVKASMGHVRDLPKSQMGVDVNQQFQPKYITIRGK
GDVLKTLKDAAKKVKKVYLAADPDREGEAIAWHLAQYLGLDMNQPLRVVFNEITKDAIKE
AFKHPRHINMDLVNAQQARRILDRLVGYNISPILWKKIRKGLSAGRVQTVTVKMIVDRER
EIQQFIPEEYWTISSMLISKGKVFEAKFYGIGDEKTELKSEADVKQVIEQIGNHPYLVKK
VTKRERKRNPAPPFITSSLQQEAARKLNFRTAKTMRIAQELYEGIDLGNKEGAVGLITYM
RTDSTRISVTAQNEAKEYILENFGADYILTEQRTQAKNENAQDAHEAIRPTSVLRTPDQL
KEVLSRDQLRLYRLIWERFLASQMASAVLDTMSVDIDVNGVTFRATGSKVKFPGFMKVYI
EGSDDNKEEESFLPPIEEGESLELKEIEPTQHFTQPPPRYSEARLIKTLEEQGIGRPSTY
APTLETIQKRGYVALEEKRFLPTELGELVVTMIEEFFPEIVDVEFTANMESDLDGVEEGI
ADWVKVLDQFYQDFAKRLSVAEEQMEEVEIKDEESDEFCELCGSVMVYKLGRFGKFLACS
GFPDCRNTKPIVKEIGVKCPNCETGSIIERKSKKNRIFYGCNRYPDCDFVSWDKPIARPC
PKCSSLLVEKKRKKQGVSVVCTNCDYQEEADS
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggctgacacgctagtgattgtcgaatccccggcgaaagcaaaaacaattggaaaatat
ttgggaagcaaatatatagtgaaagcgtccatgggccatgtacgcgacctcccaaaaagc
caaatgggcgttgatgttaatcagcagtttcaaccgaaatacataaccattcgcggcaaa
ggcgacgttttgaaaaccttgaaggacgctgcgaaaaaagtgaaaaaagtctatctcgca
gccgacccggaccgcgaaggggaggccatcgcctggcacctggctcaatatcttggcctt
gatatgaaccagcctctgcgggttgttttcaatgaaatcacgaaagacgccatcaaggag
gctttcaagcatcctcgccatatcaatatggacctggtgaatgcccagcaggcgagacga
attctggaccgtctcgtcggctacaatatcagcccgatactttggaaaaagatccgcaaa
ggattgagtgcagggcgggttcaaactgtcactgtcaagatgattgtggatcgggaaaga
gaaattcaacagtttattcccgaagagtattggacgatcagcagcatgttaatcagcaaa
ggaaaagtttttgaagccaaattttacgggattggcgacgaaaaaacagagttgaagtcc
gaagccgacgtcaaacaggtgatcgagcagatcggcaatcatccttacctggtgaaaaag
gtgaccaagcgggaaagaaagcgaaatccggctccgccttttattaccagctcgcttcag
caggaagcggctcggaagctgaatttccgaacagccaaaacgatgaggattgcccaagag
ctatacgaagggattgacctgggcaacaaagagggagcggtaggtctaattacctacatg
cgtacggattccacgcgaatttccgtgactgctcaaaatgaagcaaaagagtacatcctg
gagaatttcggtgcagactacatattgacggaacagagaacacaagcgaaaaacgagaac
gctcaggatgctcacgaagcgattcgcccgacttccgtgctgcggacgcccgaccagttg
aaagaggtcctcagtcgggatcagctccgcttgtaccgcttgatctgggagcgcttcctg
gcgagccagatggcttccgccgttttggatacgatgagtgtggatattgatgtaaacggg
gtgaccttccgcgccaccggttccaaggtaaaattccccggattcatgaaggtatatata
gaaggaagcgacgacaataaagaggaagaatcattcctgcctccaattgaagaaggagaa
tcccttgaattgaaggagatcgagcccacccagcacttcacccagccgcctccgcgctat
tcggaagcaaggctgatcaagacgctggaggagcaaggaatcggacgtccttccacttat
gctccaacactcgaaaccattcaaaagcgtggctacgttgccttagaggagaaacgcttt
ctgccgacagaactcggagagctcgtcgttaccatgatcgaggagttctttccggagatt
gtcgatgttgaatttacggcaaatatggaatcggatctggacggagtcgaagaaggtatt
gcagattgggtaaaggtgctggaccagttttatcaagactttgcaaaacggttgtcagtc
gctgaagaacagatggaagaagtcgagatcaaagatgaagaatcagacgagttctgtgag
ctgtgcggaagcgtcatggtttacaagctcggacgtttcgggaagtttctcgcttgctcc
gggttcccggactgcaggaataccaagccgattgtcaaagaaatcggcgtaaagtgccca
aactgtgaaaccggatcgattatcgaacgtaaatccaagaagaaccgtattttctatgga
tgcaaccgatatccagactgtgatttcgtctcttgggataaaccgattgcacgtccttgc
ccgaaatgcagcagcctgctggtcgaaaagaaacgcaagaagcagggcgtcagcgtggtg
tgcaccaattgcgattaccaggaagaagcagattcctaa
DBGET
integrated database retrieval system
