Brevibacillus borstelensis: RFB14_11615
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Entry
RFB14_11615 CDS
T09438
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bbor
Brevibacillus borstelensis
Pathway
bbor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RFB14_11615 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbor03019
]
RFB14_11615 (rny)
Messenger RNA biogenesis [BR:
bbor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RFB14_11615 (rny)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
Intein_splicing
YdiH
KH_2
Motif
Other DBs
NCBI-ProteinID:
WNF07999
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Position
2420698..2422254
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AA seq
518 aa
AA seq
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MSAIFENSIVMMIVLVAVLLVGLAIGYFVRKSIAEAKISSAEEAARQIVEEAKRDAEAVK
KEKVLEAKDEVFKLRSEAETELRERRNEIQRQERRILQKEEALDRKMEQLERKEEELAER
DRTIADMQSKVEHLYKEQVSELERISGLTQEEAKTIILTEVEHTVRHEMAVMIKEIETQA
KEEADKRAREIITTSIQRCAADHVAETTVSVVTLPNDEMKGRIIGREGRNIRALETLTGI
DLIIDDTPEAVILSGFDPIRREIAKTALDKLVADGRIHPARIEEMVEKARREVDERIREY
GEQATFETGVHGLHPDLIKILGRLRYRTSYGQNVLKHSMEVAHLAGLMAAELKEDVKLAK
RAGLLHDIGKAIDHEVEGSHVEIGVELAKKYNEHPVVINSIASHHGDTEPTSVIAMLVGA
ADALSAARPGARRETLETYIKRLEKLEEISESFDGVEKSYAIQAGREIRVMVQPEKIDDA
EATRLAREITKRIENELDYPGHIKVTVIRETRAVEYAK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccatttttgaaaactccatagttatgatgattgtgcttgttgccgtgctgctt
gtcggacttgccattggctacttcgtacgcaaatccatcgcggaggcaaaaatctccagc
gctgaggaagcggcacgacagatcgtggaagaagccaaacgggacgcggaagccgtcaag
aaggaaaaggtgctggaagcgaaggatgaagtattcaaacttcgttccgaagcagagacg
gaactgcgcgagcggcgcaacgagatccagcgccaggaacgccgcattctgcaaaaggaa
gaggcgttggatcgcaaaatggaacagctggagcgcaaggaagaagaattggccgaacgc
gacagaaccattgcggacatgcaaagcaaggtggagcacttatataaagagcaggtttca
gagctggagcgcatctccggtttgacgcaagaagaagcgaaaaccatcattctgactgag
gtagagcacacggttcgccacgagatggccgtcatgatcaaagagatcgagacccaagcc
aaagaggaagccgacaaacgcgctcgcgaaatcatcacaacgtcgattcaacgttgtgct
gcagatcatgtggcggaaacaaccgtttcggtcgtcacgttgccgaacgatgaaatgaaa
gggcgaattatcggtcgagaaggacgaaacattcgcgcgttggagacacttaccgggatt
gatcttatcatcgacgatactccagaagccgttattttgtcagggtttgacccgattcgc
cgggagattgcgaaaaccgctctggacaagcttgttgctgacggacgtatccatccggct
cgtatcgaggaaatggttgaaaaggctcgtcgggaagtggatgagagaattcgtgagtac
ggagaacaggctacttttgaaacaggtgttcacggcctccatccagatctgatcaagatc
ttgggacgcctgcgttaccggaccagctatggtcaaaacgtgttgaagcactcgatggaa
gttgctcatctcgccggtttgatggcagcggaattgaaagaggacgtgaagcttgcaaaa
cgggcaggccttttgcacgatatcggaaaagcaatcgaccacgaagtggaaggttcccac
gtggaaattggcgtcgagctggctaagaagtacaacgaacatcctgtggttatcaacagt
attgcatctcaccacggagacacggaaccaacttctgttatcgccatgctggttggagcc
gcggatgctctgtcggccgcacgaccaggtgcgcgccgcgaaacgctggaaacctatatc
aagcgtctggaaaagctggaggagatctccgagtcgttcgatggcgtggaaaaatcttac
gccattcaggctggacgcgagattcgcgtcatggtgcagcctgagaaaatcgacgatgcc
gaagcaactcgtctggcacgtgagattacgaagcgaattgaaaatgaacttgactatcca
ggtcacatcaaggttaccgttattcgtgagaccagggcagtcgagtatgcaaagtaa
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