Brevibacillus borstelensis: RFB14_17430
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Entry
RFB14_17430 CDS
T09438
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bbor
Brevibacillus borstelensis
Pathway
bbor03410
Base excision repair
bbor03430
Mismatch repair
bbor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RFB14_17430 (recJ)
03430 Mismatch repair
RFB14_17430 (recJ)
03440 Homologous recombination
RFB14_17430 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbor03400
]
RFB14_17430 (recJ)
DNA repair and recombination proteins [BR:
bbor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
RFB14_17430 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RFB14_17430 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RFB14_17430 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
RHH_3
Motif
Other DBs
NCBI-ProteinID:
WNF04179
LinkDB
All DBs
Position
complement(3574680..3577037)
Genome browser
AA seq
785 aa
AA seq
DB search
MLRAKTRWQLAAYDNELAELIARECGLAPLVAKLLAIRGIDSPQRAKEFLQAGPELFHDP
FALYGMESSVYRIRQAIERKEPICIYGDYDADGVSSTSLMVHLMRRMGAVFDYYIPNRFT
EGYGLHKEAMSQIHERGFKLIITVDTGISAVEQVDFAKQLGLDVIVTDHHEPPEVIPEAF
AVINPKQPACTYPFDMLAGVGVAFKLAHALLEEPPLDLVDLAALGTIADLVPLVDENRIL
ARLGLQRLNHTRNPGLQALIKVSGLADAEKLTAGHVGFALGPRLNAGGRLETAEAAVKLL
TTEDGQEAEEAAQQLDELNRERQELVQKMTDEAISMVLEKYPLDENRVLVVAKEGWNVGV
VGIVASRLVEKFYRPTIVLGIDPEKGTAKGSARSIAGFDMYEALTACKEWLPHYGGHTMA
AGMTLPVDNLEAFRKQLNKLAFEWLTDEDLIPLTKVDVALEMPEITLETAEQLELLAPFG
MGNPTPLVLVNDVEASGMRTIGRDDTHLKCSLVKDACQIDAIGFNWAHIVSQVTPKARYQ
VLGEMSVNEWNGNRKPQITIRDIAVPHRQIFDWRGCRDKLDKWRKLQESSETLTIMFRQE
SYEELFPVAALGGSTDSLLYLSPNHAANPAARSNVILYDLPKTRSDLAGAVAYLERAERI
YCLFGDPDLGLERISCPGREQFKLVYQFFMQVPLVQRIHLDAMARRLKLKRDVLEGMLAV
FAELDFITMEEGAIRLNAQAAKRPLDSSRLYMEWKEESELVTELLLSSYDSLVTHFQQQV
AATTA
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgctgagagcgaaaacacgctggcaactggctgcgtacgataatgagctggcagagttg
atcgcccgtgagtgtggtttggctccgctggtagccaagcttctcgcgattcgtggaatc
gattctccccagcgtgcgaaagaatttctgcaagcgggccccgagctcttccacgatccg
tttgccctgtacgggatggagagcagcgtgtatcgaatccgtcaggccatcgagcgcaag
gaaccgatctgtatttacggagattacgatgcagacggggtcagctcgacatcgctcatg
gttcatttgatgagacggatgggcgccgtgtttgattactatattcccaaccgcttcacg
gaaggatacggcttacataaggaggccatgtctcagattcacgagaggggcttcaagctg
atcattaccgtcgataccggtattagtgccgtggagcaagtcgactttgccaaacaactc
ggtctggacgtcattgtgacggaccaccatgaacctccggaggttatcccggaggcattt
gccgtgatcaatccgaagcagcctgcatgcacttatccgtttgacatgctcgcaggcgtg
ggcgtcgctttcaagctggcccatgcattgctggaggagccgccgctcgatctggttgat
ctggctgcgctcgggacgattgccgacctggtgccgctggtggatgagaaccggattttg
gcaagactcggtctgcagcgcttgaatcatacccgcaatccgggtttgcaggcattgatt
aaagtaagcggcttggcggatgccgaaaagctcacagccggccatgtcggctttgccttg
ggaccgagactgaatgcgggaggacgtctggagacggcagaagcggccgtgaagctcttg
actacagaggatggtcaggaagcggaagaggcagcccagcagctggatgagttgaaccgg
gagcggcaggagcttgtccagaaaatgaccgatgaagccatcagtatggtcttggaaaag
taccctttggatgaaaacagggtgctggtcgtcgccaaggaaggctggaatgtaggggta
gtcgggattgtggcttcacgactggtagaaaaattttaccgaccgacaatcgtcctcggg
atcgatccggaaaaagggacggcaaagggctcggcgagaagcattgccggctttgacatg
tatgaggctttgacagcctgcaaagagtggcttccccattacggcgggcacaccatggca
gcagggatgacactgcctgtggataacctggaggcttttcgcaaacagctaaataaactg
gcattcgaatggctgacggacgaagatttgattccgttgacgaaagtggatgtcgccctg
gaaatgccggaaatcacactggagactgccgaacaattggagctgctggccccgttcggg
atgggcaatccgacgccgctggtgctggtaaacgatgtggaggcctcgggcatgcgcacg
atcgggcgggacgatacccacttgaagtgctcgctggtgaaggatgcctgccagatcgat
gcgatcggcttcaactgggcccatattgtttctcaggtgacgccgaaagcacgttaccag
gtgctaggcgagatgtcggtaaatgaatggaacggaaaccggaagccgcaaatcaccatc
cgggatatcgctgtgcctcaccgtcaaatttttgattggcgcggctgcagagataagctc
gacaagtggcggaagctgcaggagagcagcgagacattgacgatcatgtttcggcaggaa
agctacgaggagctgttccccgtcgctgcgctcggaggcagcacagacagcttgttgtac
ctctcgccgaaccacgctgccaatcccgccgccagatcgaatgtgattctctacgatctg
cccaagacccgcagcgatctcgctggtgcggtggcgtatctggagcgggcggagcggatt
tactgtttgttcggggaccctgacctcggacttgagcggatctcctgtccgggccgcgaa
caatttaaactcgtctatcaatttttcatgcaggttcccctggtgcagcgaattcatctg
gatgcgatggcacgcaggttgaagctgaagcgggatgtactggaagggatgctcgccgta
ttcgcagagctggacttcattacaatggaggaaggggccatcaggctcaacgcccaagca
gcgaagcgtccgctcgacagctcccgcctgtatatggagtggaaagaagaaagcgaattg
gtaacggaactgctgctctcttcgtacgattcactggtaactcattttcaacagcaggtg
gcagcgaccaccgcgtag
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integrated database retrieval system
