Brevibacillus borstelensis: RFB14_22250
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Entry
RFB14_22250 CDS
T09438
Name
(GenBank) collagen binding domain-containing protein
Organism
bbor
Brevibacillus borstelensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen_bind
SpaA
SdrD_B
Big_8
Big_9
Cadherin_4
Gram_pos_anchor
Cadherin_5
DUF3188
Motif
Other DBs
NCBI-ProteinID:
WNF05066
LinkDB
All DBs
Position
complement(4587335..4591738)
Genome browser
AA seq
1467 aa
AA seq
DB search
MKDEEGNNITEIRPDQGSMVKIIFDWHLPEGHTYKGGDTFTFDLPDKFKVDRLLDGPLTG
DVGTFEVTPEGTVTFTFSEDVENDEFVGTFEVWRTFDESKFSGGTKQQIEFPFGETINVH
FKANIREEMDKQGTAKKMNPSEIDWVVDFNKGEQKITGATFQDSIPAGLELVSSSVEVYE
LEVMLDGSVRQGSAVTIQPTVSGNQFQLVFGDIDKAYRVKYKTNILEAKNTTYTNNVSVT
GGSYAKDDSASVSVAFSEPLAKKSLDYKSSTQTLTWSIEYNYNEQVIAPGSAWIVDTFET
EQTQEFLKDTLKVYEVTIDENGKATRGNQVASNEYIIDDTLPNGFKLDFPNGVQSAYEII
YDTKAKDRVRKSVNVTNKAEMYDGTTKQATKGMYQVIFWKDAKNEDINYSTKTILWKMYL
NYDNYQMDEVVITDHYKGQGIELDKDSLKISGLTEGTDYTIEPINNYREGFTIKFNHPIS
TKVDIEYKTKFDPNYFNAHDITNHGKLTWLENGVSYEREDSATVSSDRYTKNNGNKTGTY
NPKTKTITWIIDVNYNLQEINQAVIKDFYQGEQTFVKESLKVNRLNLQGGADQVEVKEEL
PSSAYSFEGGLKNSEGHEGFALTFKDPINSAYRITYQTSLKGHEVLAEYMNDATMSDGGG
PALFAQSASVKPKHGGEYILKQGKQGTGADAENAFWTIYLNRNQSWIDAGAKVTDKLSDN
QVLLPESFQLYQTVVDANGVVSKGEPADPADYELKVLTPADGEHSFELIFKKPIESAYIL
EYKSFIIAENGEYIKNSAAFAGRTSLADDGSGQGGIKVNLSGAGGGAFPAGKAFIKIVKT
DAASGELLAGATFELYDKTGKMLLETLVTDEQGVAVTKKKYSFKEYVLKEKSAPSGYLVD
EAYASGKLIAFKEDKEISVTNQKGDWSFKLTKVDSEDGEKKLEGAVFKLQRKNGDKFEDV
ADHTSLVTDANGELYLAKLEPGDYQLIETSAPKGYKLDDTPIPFTIRPNQTAVIPWTMKN
VANRGSVELVKVDEFDHNITLAGAVFELRDADGKTLQSNLSTDENGKLVIPDLKAGKYQF
VEITAPTDYLVSQETLEFEIVNEDEVVQKIFTNKLIPGSATLTKVDSNRPDVKLEGAQFR
VLDENKKPILSGLSTDKNGELHVPDLRPGLYYFEETRAPSGYVIKDRLTEFEIKKNEITT
VTIGNVRYSGGGGGGTPPVDPPNPPVDPPNPPVDPPNPPVDPPNPPVDPPNPPVDPEKPE
KPEKPGKDKPDRPDRDEPEEKPEIPGVPSKPSKPGEPSMPEVPVTPTPVEPTPEKPVDPA
PVTPVDPEPTTPSPSVPTSPTKPVEKVDKPVGSVKVPEGGTATIGKQPKHGTVTVDPSGK
WVYTPNGGKKQKDSFSIIVKDKDGNEEEMLYEVDGDVPTGGIHPDKAAKKVLPKTGEESH
LPLQLAGAGLIVLGAWLYRRTRSMRNM
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatgaggaaggtaataacattaccgagattcgtcctgatcagggatcaatggta
aagatcatcttcgactggcatcttccggaggggcacacctataagggtggcgacactttt
accttcgatctgccggacaaatttaaggtagaccgacttttggatggacctctcacgggg
gacgtagggacatttgaagtaacaccggaaggcaccgttaccttcacttttagcgaagat
gtggagaatgacgaattcgtcggtacgtttgaggtttggcgaacctttgacgaaagcaaa
ttttccgggggaacgaagcagcagatcgaatttccgttcggagaaacgatcaacgttcat
ttcaaagccaatatccgggaagaaatggacaagcaaggaacagccaagaaaatgaaccca
agcgagatcgactgggttgtcgattttaacaagggcgagcaaaagattacaggcgcgacc
ttccaggatagcatacctgccggacttgaactcgtttcttcttctgtcgaggtatatgag
ctggaggtcatgctggacggaagcgtaaggcagggaagtgctgtgacgatacagccaaca
gtctccggcaatcagttccagctggtctttggagatatcgataaagcgtatcgcgtcaag
tacaaaacaaatatccttgaggccaaaaatacgacatacaccaacaatgtgtcggttacg
ggcggttcgtacgcaaaggacgattcagcatccgtcagtgtggcattcagcgaaccgctc
gcgaaaaagtctcttgattacaagtcttctacacaaaccctcacttggtccattgagtac
aattacaatgagcaagtgatcgcaccgggaagtgcctggattgtcgatacctttgaaact
gagcagactcaggaattcctcaaggacacactgaaagtctacgaggttaccatcgacgaa
aacggtaaggcgacccggggaaaccaagtggcttctaatgaatacatcatagacgataca
cttccaaacggctttaaactggactttccgaacggcgttcagtctgcctatgaaatcatt
tacgacacaaaagcgaaggaccgtgttcgcaagagtgtcaatgtgacgaacaaggcagag
atgtacgatggcacgactaaacaggcaacgaaagggatgtaccaggtcatcttttggaag
gacgccaaaaacgaggacatcaactacagcaccaagaccattctctggaagatgtatctg
aactatgacaactatcaaatggacgaagttgtcatcaccgaccactacaagggccaaggg
attgagcttgacaaagatagcctgaaaatttccggattgacagaggggacagattacacg
atcgagcccatcaacaattatcgcgaagggtttacgatcaagttcaatcatccgatcagc
acgaaagtggacatcgagtacaagacaaagtttgacccgaactacttcaatgcccatgac
attaccaaccatggaaagctgacatggcttgaaaacggagtgtcatacgagagggaagat
tcggcaacggtttcctcggaccgttacaccaagaacaacgggaataaaacggggacgtat
aaccctaaaacgaaaaccatcacctggatcatcgatgtaaactacaatctgcaagagatt
aaccaggcggtgatcaaggatttctatcagggagagcaaacatttgtcaaggaatccctg
aaggtgaatcgtttgaacctccagggtggagccgaccaggtagaggttaaagaagagctg
cctagcagtgcgtattcgtttgaaggcgggctgaagaacagtgaaggtcacgaaggcttt
gcactgacgtttaaagatcccatcaactctgcatatcgcatcacgtaccagacgagcctg
aaaggccatgaggtcttggcagaatacatgaacgatgcaaccatgagcgatggcggcggg
ccggcgttgtttgcccaatccgcttcggtgaagccaaagcatggtggggagtatatcctt
aaacaaggcaagcagggaacaggggcagatgcagaaaatgcgttctggaccatttacctg
aatcgaaaccagtcctggatcgatgccggtgcgaaagtaacggacaagctgtctgacaat
caagtgctccttccggaatccttccagctctatcagacggtggtggatgccaacggggta
gtgagcaaaggcgaaccagccgatcccgcggactacgaactgaaagttcttacgccagcg
gatggggagcatagctttgaattgatcttcaaaaagccgattgagagcgcctatattttg
gaatacaagtcgttcatcatcgcggaaaatggagaatacatcaagaacagcgccgctttt
gccggaagaacgtccctggctgacgatggcagtggacaaggtggaatcaaagtcaacttg
tcaggagctggcggaggggcgttccctgctgggaaagcattcatcaaaatcgtgaaaacg
gatgccgcatcaggtgaattattggcaggagccacattcgaactgtatgacaagacaggc
aaaatgctgcttgaaacgcttgtaaccgatgaacagggagtagcagtaacaaagaaaaaa
tacagctttaaagagtatgtactcaaagaaaaatcggccccatctgggtatctcgtcgat
gaagcgtacgcaagcggcaaattgattgctttcaaagaagacaaagaaatttcggttaca
aaccaaaaaggcgactggagctttaaattgacgaaagtcgattcggaggatggcgagaag
aagctcgaaggcgctgtcttcaaactccagcggaaaaacggcgataagtttgaagacgtt
gctgaccacacttcgcttgtaactgacgcaaacggagagctctatctcgcgaaattggag
cctggagattatcagttaatcgaaacaagtgcgccgaaagggtacaagctggatgacaca
ccgattcctttcacgattcggccaaatcagactgccgtgattccatggacgatgaagaat
gttgcgaatcgcggttcagtagaactcgtgaaggtagacgagtttgaccataacattacg
ctggcaggagcggtatttgagctccgcgatgcagacggcaaaacgctgcagtcgaacctt
tcaacagatgaaaatggcaaactggtgataccagacctgaaggcaggaaagtatcaattt
gtcgaaattacagctccaactgattatctggtcagtcaggaaacattggagttcgagatc
gtaaatgaagacgaagtcgtacagaaaatctttacgaacaagctgatcccgggttctgca
acactgaccaaagtcgattccaatcgaccagacgtcaagctggaaggtgcgcagttcaga
gtgttggacgagaacaagaagccgatcctgagcggactgtccacggacaaaaacggtgaa
ttgcacgttccagatctcagacctggcctttattatttcgaggaaacacgagcacccagc
ggttatgtcatcaaagacagactaactgaattcgagattaaaaagaatgagattacaacc
gtaacgatcgggaacgtccgctactctggcggaggcggcggtggaacgccaccggtagac
ccacccaatccaccagtagacccgccaaatcctccggtagatccaccgaatccaccggta
gacccgccaaacccaccggttgatccgccgaatccgccggtagacccggagaaaccggaa
aagcctgagaaaccaggcaaggacaagccggacagaccggatcgggacgagcctgaagag
aaaccagaaataccgggcgttccgtccaagccgtccaagcctggcgagccttccatgccg
gaagtgcctgtcacgccaactccggtagaaccaacaccggaaaaacctgtagatccagcg
ccggtgacaccggtagatccggagccaactaccccaagcccgagcgtgcctacgagtcca
acgaagcccgttgagaaagtagacaagcctgtcggctcggtgaaagtgccagaaggcgga
acggcaaccatcggcaaacagcctaagcatggtactgtcacagtcgatccgagcggcaaa
tgggtatacacgcctaacggcggtaaaaaacaaaaagattcgttctcgattattgtcaaa
gataaagacggcaatgaagaggaaatgctgtatgaggtagatggagatgttccgactggc
ggcatccatccggacaaggcagccaaaaaggtcctgccgaagactggagaagagagccac
ctcccgcttcagttggcgggagccggcctcattgttcttggagcgtggctctacagaaga
acccgttccatgcgcaacatgtaa
DBGET
integrated database retrieval system
