KEGG   Brevibacillus borstelensis: RFB14_23510
Entry
RFB14_23510       CDS       T09438                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bbor  Brevibacillus borstelensis
Pathway
bbor03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bbor00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RFB14_23510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbor03019]
    RFB14_23510
Messenger RNA biogenesis [BR:bbor03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     RFB14_23510
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 ODP Lactamase_B_6
Other DBs
NCBI-ProteinID: WNF05278
LinkDB
Position
complement(4857419..4859098)
AA seq 559 aa
MHVEVGGKKLSEVKIFAMGGLGEIGKNMYCVEYEDEIVIIDCGVKFPENEMFGIDLVIPD
VSYLISNQHKIKALLLTHGHEDHIGAIPYILKQIKMPIYGGRLTLGLVKAKLEEHRMQNE
VQLIPISEETEIPFQNMKATFFRTNHSIPDSLGIVLETPEGLVVHTGDFKFDMTPVGKTT
EYGKIAKIGSSGNVLALLSDSTNSERYGFTMSERTVGEGILDVVRKARGRIILATFASNV
HRLQQVVDAAAECNRKVAVIGRSMEKVFLIGQELGYITMPEGMLIDIKHIDNYADNQVLI
ICTGSQGEPMAALTRIASGSHRSVSIYPEDTVIISASPIPGNTVNVSRTIDKLYRAGANV
VLNSAFDIHASGHGSSEELKLMLNFIRPKYFIPIHGEYRMLKTHSKLAQQVGIEESNIFI
MDNGDVLNCTREKAWLSKVPAGIVLIDGSGVGDVGNIVLRDRKHLAEDGLMVVVVSLDMK
NFKILTGPDIVSRGFVYVRGSESLIQEATVLVRQRLQEALDKKIKEWSELKSQINEVIKP
FIYEKTGRNPMILTILMEV
NT seq 1680 nt   +upstreamnt  +downstreamnt
atgcacgttgaggtaggaggaaagaagttgagcgaagttaagattttcgcgatgggcggt
ctcggcgaaatcggaaaaaatatgtactgtgtcgagtatgaagacgagatcgtgatcatc
gactgtggggtgaaattccccgaaaatgagatgtttgggatcgacctggtcattccggac
gtttcttacctgatcagcaatcagcacaaaatcaaggcgctcttgttgacacacggccat
gaggatcacatcggcgccattccgtacattctgaagcagatcaagatgccgatctacggc
ggacgccttaccctgggcttggtcaaggcaaagctggaagagcaccgcatgcaaaacgag
gtccaattgatcccgatctcggaggaaacggagattccgttccaaaacatgaaggccaca
ttcttcagaaccaatcacagcattccggattcgctcggaatcgtgctggagacgccggag
ggcttggtcgttcacacgggtgacttcaagttcgacatgacccctgtcggaaaaacaacc
gagtacgggaagattgccaagatcggcagctcgggaaatgtgctggcgctgctctccgac
agcacgaacagtgagcgctacggctttacaatgtccgagcgcactgtaggcgaaggcatt
ctggacgtggtgagaaaggcgcggggccgtattattttggctacgttcgcgtctaatgtg
catcgtctgcagcaagtggtcgatgccgccgccgagtgcaaccgcaaagtggcggtaatc
gggcgcagcatggaaaaggtgtttttgatcggacaagagctgggctacatcactatgccg
gagggcatgctgatcgacatcaagcacatcgacaactacgcggacaaccaggtgctgatt
atttgtacaggcagccagggcgagccgatggcagccctaacccggatcgcgtccggctct
catcgcagtgtttcgatttacccggaggacacggtgatcatttccgcgtcgccgattccc
ggcaatacggtcaacgtgagccgcacgatagacaagctgtaccgggcaggagccaatgtc
gttctcaactcggcctttgacattcacgcgtcgggccacggaagcagcgaagagctgaag
ctgatgctcaactttatccggccgaagtacttcatcccgattcacggggagtacaggatg
ctgaagactcattccaagcttgcccagcaggtcggcatcgaggaaagcaacatctttatc
atggacaacggcgatgtgctgaactgcacccgcgagaaggcgtggttgagcaaggttccg
gccggcatcgtcctgatcgatggcagcggagtgggcgacgtgggcaacatcgtgctcagg
gaccgcaagcatttggccgaggatggcttgatggtcgtcgtagtcagcctggatatgaaa
aacttcaagattctcaccggccccgacatcgtcagccgcggcttcgtctacgtgcgcgga
tccgagtcgttgatccaggaggcgaccgttctcgtccgccagcgcctgcaggaagcgctg
gacaagaaaatcaaggaatggtccgagctgaaatcccagatcaacgaagtgatcaagccg
ttcatttacgaaaaaacgggccgcaacccaatgatcctgaccattctcatggaagtgtaa

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