Bifidobacterium bifidum PRL2010: BBPR_0006
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Entry
BBPR_0006 CDS
T01340
Symbol
gyrA
Name
(GenBank) GyrA DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bbp
Bifidobacterium bifidum PRL2010
Brite
KEGG Orthology (KO) [BR:
bbp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbp03032
]
BBPR_0006 (gyrA)
03400 DNA repair and recombination proteins [BR:
bbp03400
]
BBPR_0006 (gyrA)
Enzymes [BR:
bbp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BBPR_0006 (gyrA)
DNA replication proteins [BR:
bbp03032
]
Prokaryotic type
DNA Topoisomerases
BBPR_0006 (gyrA)
DNA repair and recombination proteins [BR:
bbp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BBPR_0006 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
LAMB1
FUSC
Motif
Other DBs
NCBI-ProteinID:
ADP35153
UniProt:
A0A0H3E9Z4
LinkDB
All DBs
Position
7733..10465
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AA seq
910 aa
AA seq
DB search
MADENSNGTDLPEQNDERAEHSMEPISPQANEQLVLDDNRVAHTDIQKEMRQSYLDYAIS
VIVERALPDVRDGMKPVHRRIVYAMYDGGYRPDRGYSKCARPVADVMGNYHPHGDAAIYD
SLVRMAQPWSMRYTLVDGQGNFGSAGDDPPAAMRYTECRMMPLAMEMVRDIDKDTVDFVP
NYDGRTQEPTVLPARFPNLLANGSSGIAVGMATNIPPHNMRELAEGVHWTLDHPEASREE
LLNALIGIIKGPDFPTGATILGHKGIEQAYRTGRGLITMRAVVNTEEIKGRMCLVVTELP
YQVNPDRLAASIREGVRDGKIQGIADMRDETSGRTGQRLVLVLKRDAVPKVVLNNLYKHS
QLQQTFGANMLALVDGVPRTLSLDAFIRHWVNHQLEVIERRTRYLKREAEERDHILQGLL
KAMDAIDEVIRLIRSSQGREDARPKLMEFLDIDQVQADAILSMQLVRLANMERQKIIDEH
EELMRKIADYNDILAKPERQRTIVGDELDEIVAKYGDERRTKILPYSGEMNVEDLIAEEN
VVVTVTHSGFIKRTKANEYRAQHRGGKGIKGAKLREDDVVDHFFLTSTHNWLLFFTNKGR
VYRIKAYELPEGSRDSKGQHVANLLQFGPDETIQTVLSIPNYEVAKYLVLATRTGKVKKT
ALAEYDSPRQGGLIAVRLAADEETGEPTDELIGAALCNAADDIILVSKQGMSLKFAADND
QLRPMGRQTAGVQGMKFRGDDELLAMDVVPEDSKQDLLVVTNEGFAKRTAISEYRLQGRN
GFGVKAVQLAEGRGSLVGALIVSEDDQVMAIMKSGKVIRSNVTEVKRTGRTTQGVTLAKP
DKGDEIISIARNEETGEDEVETTDDTAAAASATTSPDTAENTPDTADSVASGSDSGAASD
ENVNNTDDEA
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
gtggcagacgaaaacagcaacggcaccgacctgccggagcagaacgacgagcgtgccgaa
cactcgatggagcccatcagccctcaggccaacgaacagttggtcctcgacgacaatcgc
gtggcccacaccgacatccagaaggagatgcgtcagtcgtacctcgactatgccatctcc
gtcatcgtcgaacgagcccttccggatgtgcgcgacggcatgaagccggtgcaccgccgc
atcgtgtacgcgatgtatgacggcggctaccgtcctgatcgcggctattccaagtgcgcc
cgacccgtcgccgacgtgatgggcaactaccacccacacggcgacgccgcgatctacgat
tcgctggtgcgcatggcccagccgtggtcgatgcgatacacgctggtcgacgggcagggc
aacttcggttcggccggtgacgacccgcccgcagccatgcgttacaccgagtgccgcatg
atgccgcttgcgatggaaatggtgcgagacatcgacaaggacaccgtcgacttcgtgccc
aactacgatggccgtacgcaggaacccaccgtgttgcccgcgcgcttcccgaacctgctg
gccaacggctcgtccggcatcgccgtcggcatggcgaccaacattccgccgcacaacatg
cgcgagctggcggaaggcgtgcattggacgctcgatcatcccgaagcgagccgtgaagag
ctgctgaacgcactcatcggcatcatcaaggggccggacttcccgaccggcgccacgatc
ctcggccacaagggcatcgagcaggcgtaccgcaccggccgcggcctgattacgatgcgc
gcggtggtcaacaccgaggagatcaagggccgtatgtgcctggtggtcaccgagctgccg
tatcaggtgaatcccgaccgtctggccgcttccatccgagaaggcgtgcgcgacggcaag
atccagggcatcgccgacatgcgcgacgagacctcgggccgtaccggccagcgactcgtg
ctcgtgctcaagcgcgacgccgtgccgaaggtcgtgctcaacaacctgtacaagcactcc
cagctgcagcagacgttcggcgcgaacatgctcgcgctggtcgacggcgtgccgcgcacg
ctgagcctcgacgccttcatccgccattgggtgaaccaccagctcgaagtcatcgaacgc
cgtacccgttacctcaagcgcgaggccgaggaacgcgaccacatcctgcagggcctgctc
aaggccatggacgccatcgacgaggtcatccgcctcatccgctccagccagggccgcgag
gacgcccggccgaagctgatggagttccttgacatcgatcaggtgcaggccgacgccatc
ctttccatgcagctggttcgactggccaacatggaacgccagaagataatcgacgagcat
gaggaactcatgcgcaagattgccgactacaacgacatcctcgccaagccggaacgccag
cgtacgatcgtcggcgacgagctcgacgagatcgtcgcgaaatacggtgacgaacgtcgc
acgaagatcctcccctactcgggcgagatgaacgtcgaagacctgatcgccgaggagaac
gtggtggtcaccgtcacgcactccggcttcatcaagcgcaccaaggccaacgaataccgc
gcacagcatcgcggcggcaagggcatcaagggcgccaagctgcgtgaggatgacgtggtg
gatcacttcttcctcacgtccacgcataactggctgctgttcttcaccaacaagggccgc
gtctaccgcatcaaggcgtacgagctgcccgaaggctcgcgcgattccaagggccagcac
gtggcgaacctgctgcagttcggtcccgacgagacgattcagaccgtgctgtcgattccg
aactacgaggtcgccaagtatctggtgcttgccacccgcaccggcaaggtcaagaagacc
gcgctggccgagtacgattcgccgcgtcagggcggactcatcgcggttcgtctcgcggcc
gacgaggagaccggcgagcccacggacgagctgatcggcgccgcgctgtgcaacgccgca
gacgacatcatcctcgtctccaagcagggcatgagcctcaagttcgcggcggacaacgac
cagctgcgtccgatgggacgccagaccgccggcgtgcagggcatgaagttccgcggggat
gacgaactgctcgccatggacgtggttccggaggactccaagcaggacctgctcgtggtc
accaatgagggcttcgccaagcgcaccgcgatcagcgaatatcgactgcaggggcgtaac
ggcttcggcgtcaaggcggtacagctcgccgaaggtcgcggatcgctggtcggtgccctg
atcgtaagcgaagacgatcaggtcatggcgatcatgaagtccggcaaagtgatccgttcc
aacgtcaccgaagtcaagcgcaccggccgcactacgcagggcgtgacgctcgccaagccc
gacaagggcgacgagattatctccatcgcccgcaacgaggaaaccggcgaagacgaagtc
gagacgacggatgatacggctgcggccgcatccgcgaccacgtctcccgatacggccgaa
aacactccggataccgcggatagcgtcgcatccggcagtgattcgggcgcggcatctgac
gagaatgtgaacaacacggatgacgaggcataa
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