Bifidobacterium bifidum PRL2010: BBPR_0080
Help
Entry
BBPR_0080 CDS
T01340
Symbol
rmlB
Name
(GenBank) RmlB dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
bbp
Bifidobacterium bifidum PRL2010
Pathway
bbp00521
Streptomycin biosynthesis
bbp00523
Polyketide sugar unit biosynthesis
bbp00525
Acarbose and validamycin biosynthesis
bbp00541
Biosynthesis of various nucleotide sugars
bbp01100
Metabolic pathways
bbp01110
Biosynthesis of secondary metabolites
bbp01250
Biosynthesis of nucleotide sugars
Module
bbp_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
bbp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BBPR_0080 (rmlB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BBPR_0080 (rmlB)
01055 Biosynthesis of vancomycin group antibiotics
BBPR_0080 (rmlB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BBPR_0080 (rmlB)
00525 Acarbose and validamycin biosynthesis
BBPR_0080 (rmlB)
Enzymes [BR:
bbp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
BBPR_0080 (rmlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
NmrA
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
ADP35217
UniProt:
A0A0H3E7J9
LinkDB
All DBs
Position
complement(92196..93218)
Genome browser
AA seq
340 aa
AA seq
DB search
MTQEVFTPKNIIVTGGCGFIGSNFVHYVYNNHPDVHITVLDALTYAGNLDNIKPLLGDHV
DFVHGNICDAELLDKLVPGHDAIVHYAAESHNDNSIANPEPFLKTNVEGTFRLLEAARKY
DVRYHHVSTDEVYGDLALDDPHKFTEETPYHPSSPYSSTKASSDLLVRAWRRTFGVRMTI
SNCSNNYGPYQHVEKFIPRQITNILEGIRPKLYGDGLNVRDWIHTDDHSSAVWTILTKGV
LGETYLIGANGERNNITVLKDILEVMGKAPDDFDHVKDRPGHDRRYAIDSTKLQTELEWK
PRHTDFQSGLEHTIKWYTDNRDWWEPVKAATEAKYKQQGQ
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagaagtgtttactccaaaaaacatcatcgtgaccggcggctgcggcttcatc
ggttctaatttcgtccattatgtatacaacaaccaccctgacgtgcacatcacagtgttg
gacgcattgacatacgcgggcaatcttgacaacatcaagccattgctcggcgaccacgtt
gattttgtgcatggcaacatctgcgacgctgaactgctggacaagctggtacccggacat
gatgccatcgtgcattacgccgccgagtcgcataatgacaactcaattgccaacccggag
ccgttcttaaagaccaatgtggagggtacgttccgccttctagaagcggcacgcaaatac
gatgtgcgctatcaccacgtcagcaccgatgaggtctacggtgacctggctcttgacgac
cctcataaattcaccgaggaaacgccttaccatccttccagcccgtactcttccacaaag
gccagttcggatttgctggtccgcgcatggcgccgtaccttcggtgtgcgcatgaccatc
tccaactgctccaacaactacggtccgtaccagcacgtggaaaagttcatcccgcgacaa
atcactaatatcttggaaggtattcgtcctaagctgtatggcgacggtctgaacgtccgt
gactggattcacaccgatgatcactcatccgccgtgtggaccatcctcaccaagggtgtc
ttgggagaaacctatcttatcggcgccaatggcgagcggaacaatatcaccgtgttgaag
gacattcttgaagtcatgggcaaggcccccgatgatttcgaccacgtcaaagatcgtccc
ggacatgatcgtcgctatgcaatcgactccaccaagcttcagaccgagcttgagtggaag
ccgcgccatacagatttccagagtggtttggaacacaccattaagtggtataccgacaat
cgtgattggtgggaacccgtcaaagccgcaacggaagcgaagtacaagcagcagggtcag
tga
DBGET
integrated database retrieval system
