Bifidobacterium bifidum PRL2010: BBPR_0119
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Entry
BBPR_0119 CDS
T01340
Name
(GenBank) DNA/RNA helicase (DEAD/DEAH box family)
Organism
bbp
Bifidobacterium bifidum PRL2010
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3427
ResIII
Helicase_C
SWI2_SNF2
DEAD
PLDc_2
Adaptin_binding
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
ADP35253
UniProt:
A0A0H3EAB5
LinkDB
All DBs
Position
complement(137588..140773)
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AA seq
1061 aa
AA seq
DB search
MNTRESLNPQSDLKTDATHSVLESVISGLIEPRQDAPESYKPTLISNRPGDLTMHDGISD
ALTNSDSFDISVAFVSPDAILSLFEDFRSHHANAPEQVSRLITSTKNHFNDPRAFWELLH
LQRTAGVDVRVWAGSDSSVSVAQGQPFHPKGYVFSRRMRNGTPYYDLFVGSSNLTGAALN
TQREWNLKVSSLANGELVAQVRDEIDSQIADSKPLTEEWIKQYEEDFKKYAPPRRDILKS
LEGREIQPNAMQKEALASLKKLREKGEHRAIIVSATGTGKTYLSAFDVREYRPRRMLYIA
QQQMILKAAMKSYQKVLGCPQSELGLYTGTSKQQDRRYVFATVQTMRQPEALAQFASDEF
DYVLVDEVHHAGAEGYQRVIDHFRDADFMLGMTATPERTDGINIFELFGHNIAYEIRLQK
ALDENMLCPFHYYGVAEYLGSDEDPDQDMHRLDVSQGLDAKESKQLKYEIGQLATEQRVR
YIIDKLQEYGQFGIPVTGLVFCSRQEEAHELSRLFNEHWNQQAERPYRTAAVTSKDVNGK
PLSQEKRDEYVRQLTDGELDYLFTVDMFNEGVDIPAVNQIVMLRSTESSIIFTQQLGRGL
RKFPYKDSVVVIDFIGNYNNNYLIPVALYGNTGDRDRARKNLQRKSIGLSSISFDPIAKE
RVLESLDTADWSEMKKLSEQYRQVRYELGRIPMLMDIYAYDPSLPYTLATKRSNYLDFVR
SREKSLGGGKNHETTFEDQLDPVTDTEDAVLKMATELLLPGLRPHELAILERLCRLAEER
LDNETPVSWNASAPISRDALLDAIRADFPQADLSDAQFDSAISVLDYSYFTGPNRKRFGN
LPLVEMLADDDQGEPAYRLSSGFVNMLAENRTFRIFLADTLRTGLANCRDLFQEAQSRRR
AFDHAFLYERKYSMADVMQLCGWKKENTPQNVGGYLLDKDTNTMPIFVKYAASQYEDEFL
NAQEMKYFSKNGRTPQSPEFQWALSGVGPDWGRTHFVPLFVMRKAEEADGKYYYVGHVAA
FDNPTLTTKPNAAGDGTVKVTLSTLRLARPLDPELYRHLVG
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgcgagaatcactcaacccgcagtcagacctcaaaaccgatgccacgcattcc
gtgctggaaagcgtcatctccggactgatcgaaccccggcaggacgcccccgaaagctat
aagccaacgctgatttcgaaccgcccaggcgacctcaccatgcatgatggaatcagcgat
gcgctcacgaacagcgattccttcgacatctccgtcgccttcgtctctcctgatgccata
ctcagtttgttcgaggacttccgcagtcatcatgccaatgcgcccgagcaggtcagcaga
ctgatcacgtcgacgaagaatcatttcaacgacccacgcgctttctgggaactgcttcac
ctacagcggacggcaggcgtggacgtccgcgtgtgggcaggctccgactcttcagtatca
gtcgctcaagggcagccgttccatcccaaaggatacgtattctcgcgccgcatgcgcaac
ggcaccccgtactacgacctgttcgtcggcagttcgaatcttaccggcgccgcattgaac
actcaacgcgaatggaatctcaaggtctcatccctcgccaatggcgaactggtcgcgcag
gtgcgagatgaaatcgactcacagatcgccgattccaagccgctcaccgaggaatggatc
aaacagtatgaggaggatttcaagaagtacgcgccgccacggcgcgacattctgaagtcc
ctcgaaggccgtgagatccagccgaacgccatgcagaaagaagccctcgcgagcctgaag
aaactacgcgagaaaggggagcatcgtgcgatcatcgtgtcggccacgggaacaggcaaa
acctatctttccgcgttcgacgtgcgtgagtaccggccccggcgcatgctgtacatcgcc
cagcagcaaatgatcctcaaagcggcgatgaaatcctaccagaaggtgctcggttgtccg
caatccgagctgggactgtataccggcaccagcaaacaacaggatcggcgctacgtgttc
gccacggtgcagaccatgcgtcagccggaggccctggcgcaattcgcctctgacgagttc
gactacgttcttgtcgacgaagttcatcatgcgggcgccgaagggtatcagcgcgtcatc
gaccatttcagggacgccgacttcatgctgggcatgaccgccacaccggaacgcaccgat
ggcatcaacatcttcgagttgttcggccacaacatcgcctatgagatccggctacagaag
gctctggacgaaaacatgctctgcccgttccattattacggcgtcgcagaatatctcggt
tccgacgaggacccggaccaggacatgcaccgcctcgatgtttcacaggggctcgacgcg
aaggagtcgaaacagctcaaatacgagatcgggcagctcgccaccgagcagcgcgtgcgc
tatatcatcgacaagctgcaggaatacgggcaattcgggatccccgtcaccgggctggtg
ttctgcagcaggcaggaggaggcgcacgagctgtcccgcttgttcaacgagcattggaac
cagcaagcggaacgcccctatcgcacggcagcggtgaccagcaaagacgtcaacggcaag
ccgttatcgcaggaaaaacgcgacgaatacgtccggcagctcaccgacggcgaactcgac
tacctgttcaccgtcgacatgttcaacgaaggcgtcgatatccccgccgtcaaccagatc
gtgatgctgcgcagcacagagtccagcatcatattcacccagcagcttggccgcggactg
cgcaagttcccgtacaaggacagcgtcgtggtcatcgatttcatcggcaactacaacaac
aactacctgatccccgtggccctgtacggcaacaccggtgaccgcgaccgcgcgcgcaag
aacctgcagcgcaaatcgatcgggttgtcctccataagcttcgacccgatcgccaaggaa
cgcgtgctggaatcactggacaccgccgactggtccgaaatgaagaagctatcggaacaa
taccggcaggtgcgatacgagctcggacgcattccgatgctcatggatatctacgcctac
gatccttccttgccgtatacattggccacgaagcgcagcaactacctcgatttcgtgcga
tcgcgcgagaagagcctcggcggcggcaagaaccacgagacaacatttgaggatcagctg
gacccggtaaccgacaccgaagacgcggtcctcaagatggccacggaattgctgctgccc
gggctgcgccctcatgagttggccatcctcgaacggctgtgtcggcttgccgaagagcgc
ctggataacgagactcctgtcagctggaacgcatccgcgccaatcagtcgagatgcgctg
cttgatgcgatccgtgcggacttcccacaggctgatctctcggatgcgcagttcgactcc
gctatcagcgtgcttgactactcatacttcaccggaccgaatcgcaaacgtttcggaaac
ctgccactggtggagatgctggccgacgatgatcagggcgaaccggcctatcgtttaagc
tccggcttcgtcaacatgctcgccgaaaatcgcacgttccgcatctttctcgcagacacg
ctgcgcaccggtttggccaattgccgagacctgttccaggaggcgcagagccggcgacgc
gctttcgaccatgcattcctgtatgagcgcaaatattccatggccgacgtcatgcagctg
tgcggatggaagaaggagaacacgcctcagaacgtaggcgggtacctgctcgacaaagac
accaacaccatgcccatcttcgtgaagtacgcggccagccaatacgaagacgagttcctg
aacgcacaggagatgaagtacttcagcaagaacgggcgcaccccgcaatctcccgaattc
cagtgggcgctgagcggtgtgggaccggactggggccgtacgcatttcgttccgctgttc
gtcatgcgcaaggcggaagaggccgacggcaaatactattacgtcgggcacgtcgccgcg
tttgacaatccgacgctcactaccaagccgaacgcggccggagacggtacggtgaaggtc
acgctctccacactgagacttgcgcggccgctggatcctgagctgtaccggcaccttgtc
gggtga
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