Bifidobacterium bifidum PRL2010: BBPR_0212
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Entry
BBPR_0212 CDS
T01340
Name
(GenBank) Helicase
Organism
bbp
Bifidobacterium bifidum PRL2010
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SNF2_assoc
Helicase_C
SWIM
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
ADP35341
UniProt:
A0A0H3E849
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Position
260112..264131
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AA seq
1339 aa
AA seq
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MDWHASVYGSRSGGGQYRDFSDGDADDDGVTYGARGSYADMADDTAGAAPLPPSVDDAEL
RRLGGNAVVFRAKDVLKSGRMHDMAVSFNVPDSPRTSGTMLTGARANVRLTALVKGADRY
ADDYRVSAAIDTDAGKVGQSSCTCPAYGRFRGVCKHVIALVMAYNEHPDDFAAADDGNGS
TNGIGRGAAGLVPWQPAVRTTRALDLFMRQQDDERTRRSQSRQLDLLKEIGGLADSGGVA
GAAQTARFMPIASVSLRLSLSFSLNSCVAKFRIEVPSRGISYVVKDIASLLQSVKNREFV
AYGKKLAFVHSRDAFDERSRNLLDVLSRAQDIRAVINNDNSAYSYYYRRQSDDATLTLSD
GEVAELLDTYVGTEDTVEYTAPARFYAPTMRVSVVDGNPDLGLAVERGDDPEASNGSTAA
AGYVIRHAQRVERFIEGQRSHYVIARPFSQAESGAGVGSGGRALLSVDRATIYRCDADFA
QKRALLSLLCGENDREAMYLSESDVDRFVRTVLPQLVSRQENEAGRSVNAIGASAGPNAE
DGSAASSVFDRLVPPAGRETGVPAHGGLIIDVPPELLAKMRVPCRLAFYLDRDRAGVTCD
AQAHYGDKHYHVFDGVGVDASMRDKEMERLAVEAMLHYFPRPSGAVAAIPESDDEAIYRL
LTEGLAVLRGLGDVMATPAFDGLTAMPRPTISIGLSVKSGLVEISPIADEIDPDDVPGLL
ASYRRRRRFHRLRNGSFVDMRNVDMSDVDEIADDLGLRAADLESGSITVPAYEAYYLDHQ
VDDDAKDASFTAYLDGLRVIDPSTYRVPAALVSVLRPYQAEGFRWLNAVCDKGFGGILAD
EMGLGKSVQLLSLLLARHKESRAEHRPNLIVCPASLVYNWVAEVAKHTPELRVEAIAGTK
PERRAMLDGVRAAQQDTGVSPTRESARPASAAAASDDVPDVLVTSYDLLRRDIDDYAGLE
FYCMTLDEAQYIKNAATKVSKAVRSVTAVHRFALTGTPIENRLSELWSIFDFLMPGMLGS
YAHFRERFEMPVLSGDETAQKKLQSFVGPFILRRLKSQVLKDLPDKIENVITVQLQGEQR
KLYAALEQQLRSVILRQRPADFNTGKIQILAQLTRLRQVCCDPRLIYENADGHASALSAG
VQSAAKDPQQSVKQPVKQSKARKTVSSAKLDAIIELVDSCRDAGRKMLIFSQFTSYLDLI
AQRLRADGVEYDMITGATPKKRRLELVDRFNADATPVFLISLKAGNTGLNLTGACVVVHA
DPWWNAAAQDQATDRAHRIGQTQDVNVYQIVAKDTIEERILNLQRSKTDLAQRFVDSASS
ATGRSMAALTKDDLLALLG
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atggattggcatgcgtccgtgtatggttcccgctccggcggcggccagtaccgcgacttc
tccgacggtgatgccgacgatgacggcgtcacgtacggcgctcgcggctcgtacgccgac
atggcagacgacactgccggtgccgcgccgctgccgccctccgtcgacgacgccgaactg
cgccggctcggcggcaacgccgtggtttttcgtgcgaaggacgtgctgaaatccgggcgt
atgcacgacatggccgtatcgttcaacgtgccggattcgccacgtacctcgggcaccatg
ctgacgggcgcgcgggccaacgtacgcctgacagcgctggtcaaaggcgccgaccggtac
gcggacgattaccgcgtctccgccgcgatcgacaccgacgcgggcaaggtcggccagtca
tcgtgcacatgccccgcatacggccggttccggggcgtgtgcaagcatgtcatcgcgctg
gtcatggcgtacaacgaacatccggatgacttcgccgcggccgacgatggtaacggctcc
acgaacggtatcggtcgcggagccgcaggcttggttccctggcaacctgccgtgcgcacg
acccgcgcgcttgacctgttcatgcggcagcaggacgacgagcgcacccgcagatcgcag
agccggcagctcgacctgttgaaggaaatcggcggactggctgattccggaggtgtcgcc
ggcgcagcccagacggcgcggttcatgcccatcgccagcgtgtcgctgcggctctccttg
agtttctcgctgaacagctgcgtggcgaaattccgcatcgaagtgccgtcgcgcggcatc
tcctatgtggtcaaggacatcgcctcgctgctgcaatctgtgaaaaaccgcgagttcgtc
gcatacggcaagaagctcgcgttcgtgcactcgcgcgacgcctttgacgagcgctcgcgg
aacctgctcgacgtgctctcccgcgcgcaggacatccgcgccgtcatcaacaacgacaac
agcgcatactcctactattaccggcgtcagtcggatgacgcgacgctgacgttgtcggac
ggtgaggtcgccgaactgctcgatacgtacgtcggcaccgaagacacggtggaatacacg
gctccggcacggttctacgcgccgacgatgcgcgtatcagtcgtggacggcaatcccgat
ctcggccttgcggtggaacgcggcgacgatcccgaggcctcgaacggcagtacggcggcg
gccggttacgtgatacggcatgcgcagcgcgtggaacgattcattgaaggacagcgctcg
cattacgtgatcgcgcggccgttttcccaagccgaatcgggcgcgggcgtggggtcgggc
ggtcgggcgctgctgagcgtcgatcgtgcgacgatataccggtgcgatgccgattttgcg
cagaaacgggcactgctgagcctgctgtgcggtgaaaacgatcgcgaggcgatgtatctg
agcgaaagtgatgtggatcgtttcgtgcgcacggtactgccgcaactggtctcccgccag
gagaacgaggccgggcggtcggtcaacgccattggcgcatccgccggtccgaacgcggag
gacggttccgccgcgtcatcggtctttgaccggctcgtgccgccagctgggcgtgaaacc
ggagttccggcgcacggcggcttgatcatcgacgtgccgcccgagctgctggcgaaaatg
cgcgtgccctgcaggctcgcgttttacctcgaccgcgaccgcgccggggtgacgtgcgac
gcgcaggctcattatggtgacaagcattaccacgtgtttgacggcgtcggcgtcgacgcg
tccatgcgcgacaaggagatggagcgactcgcagtcgaggcgatgctccactatttcccg
cgcccgtccggtgccgtggccgccatccccgagtccgatgacgaggcgatataccgtctg
ctgaccgaaggattggcggtgttgcgcggtttgggcgacgtgatggcgacgcccgcgttc
gacggcctgaccgccatgccgcgcccgacgatctccataggcctttcggtgaaatccggg
ctcgtggagatatcgccgatcgccgacgaaatcgacccggacgacgtgccgggcctgctg
gcgagctaccgtcggcgccgcagattccaccggctgcgcaacggctccttcgtcgacatg
cgcaacgtggatatgtccgacgtcgacgagatcgcggatgacctgggactgcgggccgcc
gatctggaatccggctcgatcacggtgcccgcctatgaggcgtactatctggaccatcag
gtcgacgacgacgcgaaggacgcaagcttcaccgcatacctggacggcctgcgcgtgatc
gatccgtccacgtaccgcgttcccgctgcgctggtctccgtgctgaggccgtatcaggcc
gaggggttccgctggctcaatgccgtgtgcgacaagggattcgggggtatcctcgccgac
gagatgggtttgggcaagagcgtgcagctgctgtcgctgctgcttgcacggcacaaggag
tcccgggccgagcaccgtccgaatctgatcgtctgcccggcctcgctggtgtacaactgg
gtagccgaggtagcgaagcacactcccgagctgcgcgtggaggccatcgccggcaccaaa
ccggaacgtcgcgcgatgcttgacggcgtgcgcgccgcacagcaggacaccggtgtgtct
ccgacgcgggaatccgcaaggccggcatcggccgcggccgcgtccgacgacgttcccgac
gtgctcgtcacctcgtatgacctgctgcggcgcgacatcgacgactatgcgggacttgag
ttctactgcatgacgctcgacgaggcacagtacatcaagaacgccgctaccaaggtgtcg
aaagccgtgcgctccgtcaccgcagtgcatcgtttcgccctgaccggcactccgatcgag
aatcggctgagcgagctgtggagcatcttcgatttcctgatgcccggcatgctcggctcg
tacgcgcatttccgcgaacggttcgagatgccggtgctgagcggcgacgagaccgcacag
aagaaactgcaatcgttcgtggggccgttcatcctgcgccgtcttaagtcgcaggtgctc
aaggatctgcccgacaagatcgagaacgtcatcacagtgcagctgcagggggagcagcgc
aagctgtatgcggcactggagcagcagctgcgctcggtcatcctgaggcagcgtccggcc
gatttcaacaccggcaaaatccagattctggcacagctgacccgactgcggcaagtatgc
tgcgacccgcgactgatatacgagaacgccgacgggcatgccagtgccttgagcgcaggg
gtgcaatccgccgcgaaagacccacagcagtccgtgaaacagcctgtgaaacagtcgaag
gcgcgcaagaccgtaagctccgcgaaactggacgccatcatcgaactggtggactcctgc
cgtgatgccggccgcaagatgctgatcttctcgcagttcaccagctacctcgacctgatc
gcgcaacggttgcgggccgacggcgtggaatacgacatgatcaccggagcgacgccgaag
aaacgccgtctggagctggtggaccggttcaacgccgacgcgacgccggtgttcctgatc
tcgctcaaggcgggaaacacgggcctgaacctgaccggcgcatgcgtggtcgtgcacgcc
gatccgtggtggaacgcggccgcgcaggatcaggccaccgatcgcgcccaccgcataggc
cagacacaggacgtcaacgtgtatcagatcgtggcgaaggacacgatcgaggagcgcatc
ctcaacctccagcgcagcaagacagacctcgcgcaacggttcgtggattccgcgtcctcc
gccaccggacggtcgatggccgcgctcaccaaggacgacctgctcgccctgctgggctga
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