Bifidobacterium bifidum PRL2010: BBPR_0444
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Entry
BBPR_0444 CDS
T01340
Symbol
vsr
Name
(GenBank) Vsr DNA mismatch endonuclease, patch repair protein
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
bbp
Bifidobacterium bifidum PRL2010
Brite
KEGG Orthology (KO) [BR:
bbp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbp03400
]
BBPR_0444 (vsr)
DNA repair and recombination proteins [BR:
bbp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
BBPR_0444 (vsr)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
PNP_phzG_C
Motif
Other DBs
NCBI-ProteinID:
ADP35552
UniProt:
A0A0H3E8K5
LinkDB
All DBs
Position
557637..558323
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AA seq
228 aa
AA seq
DB search
MSEQSVNHDERRQAAKGAGDEMTAAGKAEGKAARETGGSGKSGAKAKPGERYERGTRSYT
MSHIRGKDTRIEVLVRRYLFSRGLRFRKNDRRYPGHPDVVLPRWHTIVFINGCFWHAHQG
CSKYSIPKSNVEFWTAKLTRNHDRDIAQHAALESAGWHVIVVWECELAKPVREARLERLY
TEITASCSMASNELAGLANVAGSVNAGGSIVNSPITGSTSGHSPVNAR
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaacaaagcgtaaaccatgacgagcggcggcaggcggcgaaaggcgccggcgat
gagatgacggctgcggggaaggccgagggaaaggccgcgagggagaccggtggatccggc
aaatcgggcgcgaaggccaagcccggcgaacggtatgagcggggcacgcgcagctacacg
atgtcgcatatccgcgggaaggacacccgcatcgaagtactcgtgcgccggtacctgttc
tcgcgggggcttcggttccgcaaaaacgacaggcgctatcccggccatcccgacgtggtt
ctgcccagatggcatacgatcgtgttcatcaacggatgcttctggcatgcgcatcaggga
tgttccaagtattccattcccaaatccaacgtggaattctggaccgcgaaactgacccgc
aaccatgaccgcgacatcgcgcagcacgccgcgctcgaatccgccggatggcatgtcatc
gtcgtctgggagtgcgagctcgccaagcccgtgcgcgaggcgcgtctggaacggctctac
accgagatcaccgcgtcttgttccatggcgtccaatgagcttgctggcctcgccaatgtg
gccggttccgtcaatgcaggcggttccatcgttaattccccgattaccggctccacatcc
ggccatagtcccgtgaacgcccggtga
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