Bifidobacterium bifidum PRL2010: BBPR_0514
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Entry
BBPR_0514 CDS
T01340
Symbol
dnaE
Name
(GenBank) DnaE DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bbp
Bifidobacterium bifidum PRL2010
Pathway
bbp03030
DNA replication
bbp03430
Mismatch repair
bbp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBPR_0514 (dnaE)
03430 Mismatch repair
BBPR_0514 (dnaE)
03440 Homologous recombination
BBPR_0514 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbp03032
]
BBPR_0514 (dnaE)
03400 DNA repair and recombination proteins [BR:
bbp03400
]
BBPR_0514 (dnaE)
Enzymes [BR:
bbp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBPR_0514 (dnaE)
DNA replication proteins [BR:
bbp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBPR_0514 (dnaE)
DNA repair and recombination proteins [BR:
bbp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBPR_0514 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
tRNA_anti_2
DUF5487
Motif
Other DBs
NCBI-ProteinID:
ADP35613
UniProt:
A0A0H3EBE9
LinkDB
All DBs
Position
645218..648796
Genome browser
AA seq
1192 aa
AA seq
DB search
MERMAGNFVQLHNHTHYSLLDGASKVPDLVKRVKELGMPAVGITDHGNMHGAYELWRAAV
DSGVKPIIGIEAYVTPETARQDKTRVSWDTNWTPVPGHARNPDDVSGGGLITHLTMWAEN
DEGLVNLIKASSVANLEGRVMRYPRMDKEVLSTYSKGVIASSGCPSGIIQTRLRLGQFDE
ALRAAGEFQDIFGKDNFYIELMDHGLSIESKVTGDLLTIAKKLGAPLLATNDSHYVMEAD
KDAQDAMLCINSGATLDDPNRFKFEGSGYYIKSAEEMRELFKDHPDACDNTLEIAERCNV
IFDDHEDGAFMPQFDCPEGWDETSLFLKKVEEGLEKRYDGNPPMEVLKQADYECGVICQM
QFCGYFLVVADYINWAKEHGVMVGPGRGSAAGAMVAYAMGITELDPLKHGLIFERFLNPE
RVSLPDIDVDFDPEGRMRVLGYVADKYGHDKVAQCVIYGTIKTKQALKDSARIMGFPFEM
GTRITEALPPAATGGKDISVHDIFDPSAKRYAEAREYRELYDSDPEVKRITEEAKGIEGL
IRQTGVHACATIMGSAPITDTSPLLERTDGTVTTTFEYHTCETLGLVKMDFLGLSNLTVI
RDTLTNIEHNGKGVIDYTKIPLDDRETYQLLSRGDTLGVFQLDSDGMRSLLKTLKPDNFN
DISALIALYRPGPMSMDSHTNYAKRKNGLQKITPIHPELDEPLKQVLDETYGLIIYQEQV
QSAARILAGYSLGKADVLRRAMGKKKPEVLAKEKVPFFAGMKEHGYSEEAAEAIWEILVP
FSGYAFNKAHSAAYGLISYWTAYLKTHYPVEFMAALLQGAATNKNKTALYLGEARRMGIQ
VLSPDVNESVYEYSAVGDVVRFGLGAIRNVGENAVKDIIAERETGRGKYVNFMDFIRRVP
LTALNRRLVESLIKAGAFDSIDPNRRALFTVHESAIDSVVGLKRKQAEGQFDLFSDTEDS
SADAMGDATVAVPDIEEWDKKDKLKFERDMLGLYVSDHPLSGMQAVLAGMREMSIAHLID
RAPTMPSGQQVTLAGLITNVDRRVSKKGNPWAIVTIEDMESSIQCMFFGKVYEAASTELI
QDAVVQVRGQVEVRDETVSMRATEMQPVALETDDERPFLITLPLVALGRGNMQQLAQIIT
RHPGFCEVRLAVLDAKGNARVMTFGDRFRVKRDTSLFAEIKSLFGPSCLPTA
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
gtggaacgcatggctggaaacttcgtgcaactgcataaccacacgcactactcgctgctg
gatggggcatccaaggtgcccgatctggtcaagcgcgtcaaggagctgggcatgccggcg
gtcggcatcaccgaccatggcaacatgcacggcgcctacgagctgtggcgtgcagcggtc
gattccggcgtcaagccgatcatcggcatcgaggcgtatgtgacccctgaaaccgcgcgg
caggacaagacgcgcgtgtcatgggacaccaactggaccccggttcccggccatgcccgc
aaccccgacgatgtctcgggcggcggcctgatcacccacctgaccatgtgggcggagaac
gacgaagggctggtcaacctcatcaaggcgtcgtccgtcgccaacctcgaaggccgtgtc
atgcgatatccgcgtatggacaaggaggtgctgtccacctactccaaaggcgtgatcgcc
tcgtccggctgcccctccggcatcatccagacccgtctgcgcctaggccagttcgacgag
gcgctgcgtgccgccggcgagttccaggacatcttcggcaaggacaatttctacatcgag
ctgatggaccacggactgtccatcgaaagcaaggttaccggcgatctgctgaccatcgcc
aagaagctcggcgcgcccctgctcgccaccaacgactcgcactacgtcatggaggcggac
aaggacgcccaggacgccatgctgtgcatcaactccggcgccacgctggacgaccccaac
cgcttcaagttcgaaggatcgggatactacatcaaatccgccgaggagatgcgcgagctg
ttcaaggaccatcctgacgcctgcgacaacacgctggagatcgcggaacgctgcaacgtg
atcttcgacgaccatgaggatggcgcgttcatgccgcagttcgactgccccgaagggtgg
gacgagacctcgctgttcctcaagaaggtcgaggagggcctggagaagcgctacgacggc
aacccgccgatggaggtgctcaagcaggccgactacgaatgcggcgtcatctgccagatg
cagttctgcggctacttcctcgtcgtcgccgactacatcaactgggcgaaggagcacggc
gtgatggtgggcccggggcgaggctccgccgcaggggccatggtcgcctatgcgatgggc
atcaccgagctcgatccgctcaagcacggcctgatcttcgagaggttcctgaaccctgag
cgtgtgtccctgcccgatatcgacgtcgacttcgatcccgaaggccgcatgcgcgtgctg
ggctatgtggccgacaagtacggccatgacaaggtcgcccaatgcgtgatctacggcacc
atcaagaccaagcaggcgctcaaggactccgcgcgcatcatgggattcccctttgagatg
ggcactcgtatcaccgaggcgctgccgccggccgccaccggaggcaaggacatcagcgtg
cacgacatcttcgacccgagcgccaagcgctacgccgaggcgcgcgaataccgcgagctg
tacgactccgatcccgaagtcaagcgcatcaccgaggaggcgaagggcatcgaggggctg
attcgccagaccggagtccacgcgtgcgccacgatcatgggttccgcgccgatcaccgac
acctcgccgctgctggagcgcaccgacggcaccgtcaccaccacgttcgagtaccatacg
tgcgaaacgctcggcctggtcaagatggacttcctcggcctgtccaacttgacggtcatc
cgcgacacgctcaccaacatcgagcacaacggcaagggcgtcatcgactacacgaagatc
cctctcgatgaccgggagacgtaccagctgctgtcgcgcggagacacgctcggtgtgttc
cagctcgattccgacggcatgcgctcgctgctcaagacgctcaagcccgataacttcaac
gacatctccgcacttattgccctgtaccgaccgggcccgatgtcgatggactcgcacacc
aactacgccaagcgcaagaacggcctgcagaagattacgcctatccaccccgagctcgac
gagcccctcaagcaggtgctcgatgagacgtacggcctgatcatctatcaggagcaggtg
cagtcagccgcgcgtatcctggccggctattcgctgggcaaggcagacgtgctcaggcga
gccatgggcaagaagaagcccgaggtgctggccaaggagaaggtgccgtttttcgccggc
atgaaggagcatggctattccgaggaggccgcagaggcgatctgggagatcctggtcccg
ttctccggctatgcgttcaacaaggcgcactccgccgcgtacggcctgatctcctactgg
accgcatacctcaagacgcactacccggtcgagttcatggccgcgctgctgcagggcgcg
gcgaccaacaagaacaagaccgccctgtatctgggcgaggctcggagaatgggcatccaa
gtgctctccccggatgtcaacgagtcggtctacgagtactccgcagtcggcgacgtcgtc
cgattcgggctcggggctatccgcaacgtcggcgagaatgcggtcaaggacatcatcgcg
gaacgcgagacgggccgtggcaaatacgtgaacttcatggacttcatccgccgcgtgccg
ttgaccgcgctgaacaggcgactggtcgaatcgctgatcaaggcgggcgcattcgattcg
atcgacccgaaccgccgggcgctgttcaccgtgcacgagtcggcgatcgactcggtggtc
ggcctcaagcgcaagcaggcggaaggacagttcgacctgttctccgacacggaggattcg
agcgccgacgcgatgggggatgcgacggtcgccgtgccggacatcgaggaatgggacaag
aaggacaagctcaagttcgagcgcgatatgcttggcctctacgtgtcggaccatccgctg
agcggcatgcaagcagtgctcgccgggatgcgggagatgtccatcgcccatctgattgac
cgtgcgcccaccatgcccagcgggcagcaggtcacgctggcgggactgattaccaacgtc
gatcgacgagtctcgaagaagggcaacccgtgggcgatcgtcaccatcgaggacatggaa
agctccatccagtgcatgttcttcggcaaagtgtacgaggcggcgagcacggagctcata
caggatgcggtcgtgcaggtgcgcggccaggtcgaggttcgggacgagaccgtcagcatg
cgcgccacggaaatgcagccggtcgcgctggagaccgatgacgagcgtccgttcctgatc
accttgccgctggtggccctggggcgcggcaacatgcagcagcttgcgcagatcatcacg
cggcatccgggattctgcgaagtgcggcttgccgtgctcgacgccaagggcaacgcacgg
gtgatgaccttcggcgataggttccgcgtcaaacgcgacaccagcctgttcgccgagatc
aagagcctgttcggcccgagctgcctgccgacggcctga
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integrated database retrieval system
