Bifidobacterium bifidum PRL2010: BBPR_0658
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Entry
BBPR_0658 CDS
T01340
Symbol
clpC
Name
(GenBank) ClpC Negative regulator of genetic competence
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
bbp
Bifidobacterium bifidum PRL2010
Brite
KEGG Orthology (KO) [BR:
bbp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
bbp03110
]
BBPR_0658 (clpC)
Chaperones and folding catalysts [BR:
bbp03110
]
Heat shock proteins
HSP100
BBPR_0658 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_22
Sigma54_activat
AAA_16
AAA_14
TniB
nSTAND3
UVR
bpMoxR
ATPase_2
AAA_28
IstB_IS21
RNA_helicase
NACHT
Mg_chelatase
AAA_3
AAA_7
AAA_18
AAA_24
TIP49
Zeta_toxin
DNA_pol3_delta2
AAA_19
ResIII
T2SSE
NBD_SMAX1
Torsin
Motif
Other DBs
NCBI-ProteinID:
ADP35752
UniProt:
A0A0H3E977
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All DBs
Position
817821..820397
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AA seq
858 aa
AA seq
DB search
MFERFTDRARRVIVLAQEEARTLQHNYIGTEHLLLGLIREGEGVAAKALASKGVTLDDTR
KQVEEMIGKGNAAPNGHIPFTPHAKQVLELSLREALQLGHSYIGTEHILLGLIREGEGVG
TQVLIKMDVDLGELRSATIDMIHGNSGGANASGKGDLANAGGVQDKRSQTGSAILDQFGR
NLTAEAAEGKLDPVIGRTNEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKINAG
DVPETLKDKQVYSLDLGSMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAG
SADGALGASDMLKPMLARGELQTIGATTTDEYRKYIEKDAALERRFQPIQVHEPTIAETI
EILKGLRSRYENHHHVTITDGALQSAAELSSRYIQDRNLPDKAIDLIDEAGARLRIKRLT
APPELKELDQKVAKVAAEKDKAIKDQDFEKAAELRDNQEKLEAERKEKESSWREGESDVE
MVVNEDVIAQVISSTTGIPVFKLTQAESKKLLGMESELHKRIIGQDEAVSALSRSIRRTR
VGLKDPKRPAGSFIFAGPTGVGKTELAKALAEFLFDDEDALIRVDMSEFSEKYAASRLFG
APPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVD
FKNTIIILTTNLGTRDIAKAANTGFNLGSNAESSYQRMKDQVSSELKQQFRPEFLNRLDD
IIVFRQLTEPQVRQIVDLDIKQLNDRLFDRHMSLELTPAAKDLLAQKGFDPLLGARPLRR
VIQRDIEDAISEKILMGELEDGQRVVVDSEGEGILGEFTFRGEQFDDAKPENEPAAEPAT
EESADKSADNAAPASQEA
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacggtttaccgaccgtgcacggcgcgtgatcgtgttggcgcaggaagaggcg
cgcactctccagcacaactacatcggcaccgaacacctgctgctcggcctgatccgcgaa
ggtgagggggtcgccgccaaggcgctcgcatccaagggagtgaccttggacgacacccgc
aagcaggtcgaggagatgatcggcaaaggcaatgccgcccccaacgggcacattcccttt
actccgcacgccaagcaggtgttggagctgagtctgcgcgaggcgctgcaactcggtcac
agctatatcggcaccgagcacatcctgctcggcctgatccgcgaaggcgagggcgtgggc
acccaggtgctcatcaagatggatgtcgacctgggcgaactgcgttcggccactatcgac
atgatccatggcaacagcggcggcgccaatgcctccggcaagggcgatctggccaacgcc
ggcggcgtgcaggacaagcgcagccagaccggttcggccattctggaccagttcgggcgc
aacctgaccgccgaagcggccgagggcaagctcgacccggtgatcgggcgcaccaacgag
atcgaacgtgtcatggtcgtgctgtcgcgccgcacgaagaacaaccccgtgctgatcggc
gagccgggcgtcggcaagaccgccgtcgtcgaaggcctcgcgcagaagatcaacgccggc
gacgtgccggagacgctgaaggacaagcaggtctattcgctggatctgggctccatggtg
gccggctcgcgctaccgcggcgatttcgaggaacgcctcaagaaggtgctcaaggagatc
aagacgcgcggcgacatcgtgctgttcatcgacgagattcacacgatcgtcggtgccggt
tcggcggacggcgccttgggcgcgtctgacatgctcaagcccatgctggctcgcggtgag
ctccagaccatcggcgccaccaccaccgacgagtaccgcaagtacatcgagaaggacgcg
gcgctggaacgtcgtttccagccgattcaggtgcatgagccgacaatcgcggagaccatc
gaaatcctcaagggcctgcgctcgcgctacgagaaccaccaccacgtgaccatcaccgac
ggcgcgctgcagtccgccgcggagctgtcgtcccgctacatccaggaccgcaacctgccc
gacaaggccatcgacctgatcgacgaggccggcgcgcggctgcgcattaagcgcctgacc
gccccgcccgagctcaaggaacttgaccagaaggtcgcgaaggtcgccgccgagaaggac
aaggccatcaaggaccaggacttcgagaaggccgccgagctgcgcgacaaccaggagaag
ctggaagcggagcgcaaggagaaggaatcctcctggcgcgagggcgagtccgatgtcgag
atggtcgtgaacgaggatgtgatcgcccaggtgatctcctcgaccaccggcattccggtg
ttcaagctcacccaggccgagtcgaagaagctgctcggcatggagtccgagctgcacaag
cgcatcatcggccaggacgaagcggtttccgcgctgtcccgttcgattcgccgcactcgt
gtgggcctcaaggatccgaagcgtcctgcgggctcgttcatcttcgccggcccgaccggc
gtcggcaagaccgagctggccaaggcgctggccgagttcctgttcgacgatgaggacgcg
ctgattcgcgtggacatgtcggagttctccgagaagtatgcggcatcgcgtctgttcggc
gctcctccgggatacgtcggttacgaggagggtggcgagctcaccgagaaggtgcgccgc
aagccgttctccgtcgtgctgttcgacgagatcgagaaggcccatccggacatcttcaac
acgctgctgcaggtgctggacgacggtcacctgaccgatggtcagggacgcaaggtggac
ttcaaaaacaccatcatcatcctgaccaccaacctgggtacgcgcgacatcgccaaggcc
gccaacaccggcttcaaccttggctcgaacgcggagtccagctaccagcgcatgaaggat
caggtcagctccgaactcaagcagcagttccgtcccgagttcctgaaccgtcttgacgac
atcatcgtgttccgtcagctcaccgagccgcaggtgcgtcagattgtcgacctcgacatc
aagcagctcaacgaccgtctgttcgaccgtcacatgtcgctggagctcaccccggccgcc
aaggacctgctcgcgcagaagggcttcgacccgctgctcggtgctcgtccgctgcgccgc
gtgatccagcgcgacatcgaggacgccatctcggagaagatcctgatgggcgaactcgaa
gacggtcagcgcgtggtggtcgactccgaaggcgagggcatcctcggcgaattcaccttc
cgcggcgaacagttcgacgacgccaagcccgagaacgagccggctgcggagccggcaacg
gaggagtcagctgacaagtcggctgacaacgccgctcccgcctcgcaggaggcctga
DBGET
integrated database retrieval system
