Bifidobacterium bifidum PRL2010: BBPR_0792
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Entry
BBPR_0792 CDS
T01340
Symbol
pcrA
Name
(GenBank) PcrA ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bbp
Bifidobacterium bifidum PRL2010
Pathway
bbp03420
Nucleotide excision repair
bbp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BBPR_0792 (pcrA)
03430 Mismatch repair
BBPR_0792 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbp03400
]
BBPR_0792 (pcrA)
Enzymes [BR:
bbp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBPR_0792 (pcrA)
DNA repair and recombination proteins [BR:
bbp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBPR_0792 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
BBPR_0792 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
ADP35873
UniProt:
A0A0H3EC82
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All DBs
Position
980573..983230
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AA seq
885 aa
AA seq
DB search
MQQDPDLIARSAEELVGDLNPQQAEAVQYRGPALLIGAGAGSGKTRVLTRRIAWILTQFG
AWPSQILAITFTNKAAAEMRERLEGLIGPVAQRMWVSTFHSACVRILRRDGQSIGLASGF
SIYDTADCERLVKLVGADLNIDLKRYTPRAILSRISDYKNSLIGWQEQLKRYAPDYRPGQ
RGYQIGNFGDIEVLYSVIYAEYQHRLAMANAVDFDDLIGRTVELLRTQPQVADYYRHKFR
YILVDEYQDTNHAQYELIRELAGVDAAGQVVPDAPSAGRAGPAWITVVGDSDQSIYAFRG
ADIRNIQDFEQDFPNAKTIMLEQNYRSTQTILDAANAVIANNQGRKPKKLWTALGSGDPI
VGYAADNAEQEAAWIAGEIARVRAEEGTPYSDMAIMYRANAQSRALEGALVHAGLPYQLV
GGTRFYERREVKDAIAYLQAIVNPADNVNMRRILNVPKRGLGPRAESIIVSYADAHATTF
WDGIEHLDQIDGVPTRTGKQLAAFRDLMRSLSAFAAEHDGKPSEVVGEVLSQSGLLEELQ
RSEDPQDASRVENLSQLQSVAAEFEQNTPDATLAGFLETTALVADSDQLPSEGEDSGKVT
LMTLHTAKGLEYPVVFLTGMEQGTFPHSRAMEDADELSEERRLAYVGITRAKRRLYVTRA
AVRAQWGQANEMMPSQFLDEIPDRLIDWKRRETGMEGMRSGWSRRGFDDEFGGWDDDDFG
GTTYGGSSSYGGSSSYGSRGRSSYGGSSSFGSGSRGGSGSSYGGARGFGSSSRHGGSGRQ
GSGQQYGSGSRFGSSTGLSRGGKVTTRRTAPKSSLSSAKPASSLSKDNNLNIADFHAGDK
VTHDQYGLGTVVDTQDKGRNSVITVDFGSSGVKRLMLRVAPLEKL
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcaggatccggatctcatcgcaagaagcgccgaggaactcgtcggcgacctcaac
ccgcagcaagccgaggcggtgcagtaccgggggcccgcactgctgatcggcgccggcgca
ggatccggcaagacacgcgtgctcacccggcgcatcgcgtggatcctcacgcaattcgga
gcatggccgagccagatcctcgccatcaccttcaccaacaaggcggccgctgaaatgcgc
gaacgcctcgaaggtctgatcggaccggtcgcccagcgcatgtgggtgtcgacgttccat
tccgcatgcgtgcgcatcctcaggcgtgacggccagtcgatagggctggcgtcgggcttc
tccatctatgacaccgccgactgcgagcgcctcgtcaagctggtcggcgccgatctcaac
atcgacctcaagcgctacacgccgcgcgcgatcctctcgcgcatctccgactacaagaac
tcactgatcggctggcaggagcagctcaagcgctacgcgcccgactaccggcccggccag
cgcggttatcagatcggcaatttcggcgacatcgaggtgctgtattccgtcatctacgcc
gaataccagcatcgtctggccatggcgaacgccgtcgacttcgacgatctgatcggccgg
acggtcgaactgctgcgcacccaaccacaggtggccgactattaccgtcataagttccgt
tatatcctcgtcgacgaataccaggacacgaaccatgcccaatacgagctgatccgcgag
ctggcgggcgtggacgcggccgggcaggtcgtgccggacgccccctcggcggggcgggcc
ggcccggcatggatcaccgtcgtcggcgactccgaccagtcgatctatgcgttccgcggc
gcggacatccgcaacatccaggatttcgagcaggatttccccaacgcgaagaccatcatg
ctcgaacagaactaccgttccacgcagaccatcctcgacgcggccaacgcggtcatcgcc
aacaaccagggtcgcaagcccaagaagctgtggaccgcattgggcagcggggacccgatc
gtcggctatgccgcggacaacgccgagcaggaggccgcgtggatagcgggggagatcgct
cgcgtccgcgccgaggagggcacgccgtattcggacatggccatcatgtaccgtgccaac
gcgcagtcgcgtgcgcttgaaggcgcgctcgtgcatgccggactgccgtatcagctggtc
ggcggcacgcggttctacgagcggcgggaggtcaaggacgccatcgcgtatctgcaggcc
atcgtcaatccggccgacaacgtcaacatgcggcgcatcctcaacgtgcccaagcgcggt
ctcggacctcgtgccgaatcgatcatcgtctcatatgccgatgctcatgcgaccacgttc
tgggacggcatcgaacatcttgaccagatcgacggcgtgcccacccgcaccggcaagcag
ctcgccgcattcagggacctgatgcgctccctgagcgcgttcgcggccgagcatgacggc
aagccgtccgaagtggtgggggaggtgctctcgcagtccggtctgctcgaagaactgcag
cggtccgaggatccacaggatgcctcccgcgtggagaacctgtcccagttgcagtccgtc
gccgccgaattcgagcagaacacgccggacgccacactcgcgggattcctggagaccacg
gcgctggtggcggactccgaccagctgccctccgagggcgaggactccggcaaggtcacg
ctgatgactctgcacaccgccaagggcctggaataccccgtcgtgttcctcaccggcatg
gagcagggcacgttcccgcactcgcgggcgatggaggacgccgacgagctttccgaggag
cgtcgtctggcatatgtcggcatcacgcgtgccaagcgtcgtttgtacgtcacccgtgcc
gccgtgcgcgcgcagtgggggcaggccaacgagatgatgcccagccagttcctcgatgag
atccccgaccggctcatcgactggaaacggcgcgaaaccggcatggagggcatgcgctcc
ggctggtcacgccgcggcttcgacgacgagttcggcggatgggacgatgacgacttcggc
ggcaccacatacggcgggtcgtcctcgtacggtggttcctcgtcatacggctctcgtgga
cgttcctcgtacggtggttcctcgtcgttcggctccggttcgcgcggcggatcgggctcg
tcatatggcggggccaggggattcggctcatcttcgcgccacggcggctccggccgtcag
ggctccggacagcagtacgggtcgggcagccggttcggctcatccacgggattgtcgcgt
ggcggcaaggtcacgacgcgccgcaccgctcccaagtcatctctctcgtcggccaaaccg
gcctcgtcgctcagcaaggacaataacctcaacatcgccgacttccatgccggtgacaag
gtcacgcatgaccagtacgggctgggcaccgtcgtcgacacgcaggacaagggccgcaac
tccgtaatcacggtcgatttcggctcgtcgggcgtcaagcggctgatgctgcgcgtggcg
ccgttggagaagctctga
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