Bifidobacterium bifidum PRL2010: BBPR_0947
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Entry
BBPR_0947 CDS
T01340
Symbol
uvrA
Name
(GenBank) UvrA Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
bbp
Bifidobacterium bifidum PRL2010
Pathway
bbp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BBPR_0947 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbp03400
]
BBPR_0947 (uvrA)
DNA repair and recombination proteins [BR:
bbp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBPR_0947 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BBPR_0947 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
nSTAND1
AAA_21
AAA_16
AAA_25
DnaJ_CXXCXGXG
SMC_N
AAA_29
ATPase
Anti-TRAP
DUF7577
T2SSE
Viral_helicase1
MobB
DUF4350
RecA
DUF463
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
ADP36024
UniProt:
A0A0H3ECL5
LinkDB
All DBs
Position
1129477..1131984
Genome browser
AA seq
835 aa
AA seq
DB search
MQRIRDDASPESIEVRGARVHNLKNVDVDVPLGELVGVAGVSGSGKSSLALGVLYAEGSR
RYLEALSTYTRRRLTQASRAQVDEVLHVPAALALHQRPAVPGIRSTFGTMTELLNSLRLL
FSRLASHVCPHCGARNEPTLNVAAGLPIVCANCGKDFHAPGAESLAFNSAGACPACAGTG
IVREVNRAALVPDESKSIDEGAVLPWGSLMWDLMKQVAGAMGVRTDVPFKDLTPKERDIV
FNGPAVKKHILYKPKKGDDFAELDFTYFNAVYTVENALAKAKDEKGLKRVARFLEEKTCP
DCGGTRLSEAARAPRVRGLNLAEASAMTLDAAVDWVRGVPGSLGADMRPMATNICESFLD
VARRLLELGLGYLALDRAGATLSTGERQRVQLARAVRNRTTGVLYVLDEPSIGLHPANVD
GLLGVMRDLVADGNSVVVVDHDVRVLKACDHLIEMGPVAGAEGGHVIAQGTVGDVAANPR
SRIAPFLADGESVRERGCMPVSHMFDLGHIRMTTSQLHTVKPLDVDIPRGRLVAVTGVSG
SGKTTMVLESLIPALKARSAGEKPSEHVRSIDADGIERANLIDATPIGANVRSTVATYAD
IHDDLRRAFARSDEAKAGGWKAGDFSYNTGRLRCPTCDGTGSISLDVQFLPDVDIECPDC
RGSRYAPEADAIHRTTKDGRELTLPQLMAMSVDQALAVTGDMRKVHARLTTLHDLGLGYL
TLGEPTPALSGGEAQRLKLASEMGRAQSHAVFVFDEPTIGLHPLDVRVLLGVFDRLVASG
ATVVVIEHDLDVIANADWVIDMGPGGGESGGRIVAAGTPEQIAADANSITGRYLR
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggatacgggacgatgcgagcccggagtcgatcgaagtgcgcggcgcacgcgtg
cataacctcaagaacgtcgacgtcgacgtgcctctgggcgaactggtcggtgtggccggc
gtctccggttcgggcaagagctcgctcgcactcggcgtgctgtatgccgaaggctcacgg
cgatatttggaggcgctgtccacgtacacgcgccgccgcctcactcaagcgagccgcgcg
caggtggacgaagtactgcacgtgcccgccgcgctggccctgcaccagcggcccgcggtg
cccggcatacgctccaccttcggcacgatgaccgaattgctcaacagcctgcgtctgttg
ttctcacgtctcgcctcacatgtgtgcccgcattgcggcgcacgcaacgaaccgactctc
aacgtggccgccggcctgcccatcgtctgcgcgaattgcggcaaggattttcacgcgccc
ggcgctgaatccttggccttcaactcggccggcgcatgcccggcctgcgccggcaccggc
atcgtgcgcgaggtgaaccgcgcggcgctcgtacccgacgaatcgaaaagcatcgacgag
ggcgcggtgctgccatggggttcgttgatgtgggacctgatgaaacaggtcgccggcgcg
atgggcgtgcgcaccgacgtgccgttcaaggacctcacccccaaagaacgcgacatcgtc
ttcaatggcccggccgtcaagaagcacatcctgtacaagccgaagaaaggcgacgacttc
gccgaactcgacttcacgtatttcaacgccgtgtacaccgtcgagaacgcgctcgccaaa
gccaaggacgagaaggggctgaaacgcgtggcgcggttcctcgaggagaaaacctgcccg
gattgcggcggcacgaggctcagcgaggcggcgcgcgccccacgggtgcgcggactgaat
ctcgccgaggcgagcgcgatgaccttggacgcggcggtggactgggtgcgtggcgtgccc
gggtcgctcggggccgacatgcgcccgatggcgacgaacatctgcgaatccttcctcgat
gtggcccgccggttgttggagcttggactcggctacctcgcgctcgatcgcgccggagcg
accctgtcgaccggcgaacgccagcgcgtgcaattggcccgcgccgtgcgcaaccgcacc
accggcgtgctctacgtgctcgacgaaccgtccatcggcctgcacccggcgaatgtggac
ggtctgctcggcgtgatgcgtgacctcgtggcggatggcaactccgtggtggtcgtcgac
catgatgtgcgtgtgctcaaggcatgcgatcatctcattgaaatgggtccggtcgccggt
gccgaaggcgggcatgtgatcgcgcagggcacggtcggcgacgtggcggcgaatccgcgc
agccgcatcgcgccgttcctggccgatggcgaaagtgtccgtgaacgcgggtgcatgccc
gtctcgcatatgttcgaccttgggcatattcgcatgacaaccagtcagctgcatacggtc
aagccgctggatgttgatattccgcgcggccgtctggtggcggtgaccggcgtatccggc
tccggcaaaaccacgatggtgctcgaatcgttgattcccgcgctcaaggcacggtctgcg
ggggagaagccgtccgagcatgtgcgctcgatcgacgccgacggcatcgagcgtgcgaac
ctcatcgacgccacgccgatcggcgcgaacgtgcgttccaccgtggccacctacgccgac
atccacgacgacctgcgccgcgccttcgcccgaagcgacgaagccaaggcgggcggttgg
aaggccggcgacttctcctacaacaccggcagactgcgctgccctacatgcgacggcacc
ggttcgatttcgctcgacgtgcagttcctgcccgacgtcgacatcgaatgccccgactgc
cggggctcccggtatgcgcccgaagccgacgcgattcaccgcacgaccaaggacgggcgc
gaactcaccctgccgcagctgatggcgatgagcgtggatcaggcgttggccgtgaccggc
gacatgcgcaaggtgcatgcgcgactgaccacgctgcacgatctgggtctgggctacctg
acgctcggcgagccgacgccggcgctttcgggcggtgaggcgcaacgcctgaagcttgcc
agcgaaatgggcagggctcagtcgcacgccgtgttcgtgttcgacgagccgaccatcggc
ctgcatccgctcgatgtgcgggtgctgctcggcgtgtttgaccgactcgtggcgtccggc
gcgaccgtcgtggtcatcgaacacgacctcgacgtgatcgccaacgccgactgggtgatc
gacatggggccgggcggcggcgaaagcggcgggcgcatcgtcgccgccggcacgccggag
cagatcgcggccgatgcgaacagcatcacgggccggtacctgaggtga
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