Bifidobacterium bifidum PRL2010: BBPR_1043
Help
Entry
BBPR_1043 CDS
T01340
Symbol
uvrA2
Name
(GenBank) UvrA2 Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
bbp
Bifidobacterium bifidum PRL2010
Pathway
bbp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BBPR_1043 (uvrA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbp03400
]
BBPR_1043 (uvrA2)
DNA repair and recombination proteins [BR:
bbp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBPR_1043 (uvrA2)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BBPR_1043 (uvrA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
AAA_21
RsgA_GTPase
AAA_23
AAA_33
nSTAND3
AAA_22
APS_kinase
DnaJ_CXXCXGXG
NACHT
AAA_24
T2SSE
Viral_helicase1
cobW
FtsK_SpoIIIE
Mtrc-MtrF_II-IV_dom
Cytochrom_c3_2
Septin
Cytochrome_C7
Motif
Other DBs
NCBI-ProteinID:
ADP36110
UniProt:
A0A0H3ECW0
LinkDB
All DBs
Position
complement(1226200..1229148)
Genome browser
AA seq
982 aa
AA seq
DB search
MIERVMSSDTFLSREIRKAPMRKTDSSLVADISHIPNDLKITIQGAREHNLKNVDLAVPR
NRMVVFTGLSGSGKSSLAFDTLFAEGQRRYVESLSAYARQFLGQMDKPDVDFIEGLSPAV
SIDQKTTNRNPRSTVGTITEIYDYLRLLFARTGVPHCPECGELVSAQTPQQMVDTLLKNP
ERTRFQILAPVVRGRKGEFADLLELLRGDGYARALIDGEGRQLSDDIKLTKQKKHTIEVV
VDRLMIRDGIRQRLTDSIETALRLSKGVIVADFVDLDEKDPNRRQPFSEHRACPNGHQLQ
LDEIEPRTFSFNAPYGACPVCDGIGYKLEIDPDLVIADDSKSLSDGVIEPWGGGKTTTEY
YGHVLQGLADELGFSMDTPWRDLPEDVRHSILYGHDFKVNVSYRNRWGRLREYSTGFEGV
VRTLMRRYHETDSDQMKQYYESYMREVPCQACNGRRLRPEVLAVTVDGESIADVCDMPVE
RGLAWINGLKLEGAAATIAGEVVKEIRARLGFLNDVGLNYLTLSRAAKTLSGGEAQRIRL
ATQIGSGLVGVMYVLDEPSIGLHQRDNARLIETLHHLRDLGNTLIVVEHDQETIERADWV
VDIGPGAGEHGGEVIYSGPAKRLIEAPRSVTGDYIAGRRSIEVPAVRRKPHATKRLRVVG
ARENNLKNITVDFPLGVMTVVTGVSGSGKSTLVNTILYPVLADKLNGARIVPGKHTRVEG
LDQCDKVIHVDQNPIGRTPRSNPATYTGVWDKIRTLFAKTPEAQVRGYGPGRFSFNVKGG
RCEACHGDGTLKIEMNFLPDVYVECEECHGKRYNRETLEVKYNGKTVADVLDMPIEEAAT
FFKAYPSISRYLDTLVQVGLGYIRLGQPAPTLSGGESQRVKLATELQRRSTGKTVYILDE
PTTGLHFEDVRKLLLVLQGLVDKGNTVIVIEHNLDVVKSADWIIDLGPEGGDGGGTIVTQ
GTPEQVAQCEASWTGKFLKDML
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaacgtgtgatgagcagcgacacgttcctgtcgcgcgagatccgcaaggcaccg
atgcgcaagaccgactcctcattggtggcggacatctcacatatcccgaacgatctgaag
atcaccatccagggtgcgcgtgaacacaatctgaagaacgtggatctcgccgtgccgcgc
aacaggatggtcgtgttcaccggactgtccggctccggcaagtcatcgctcgcgttcgat
acgctgttcgcggaggggcagcgccggtatgtggagtcgttgtccgcgtatgcgcgtcag
ttcctcgggcaaatggacaagccggatgtggatttcatcgagggattgagccctgcggtg
tcgatcgaccagaagaccacaaaccgcaatccgcgttcgaccgtgggcacgatcaccgag
atttatgactatctgcgactgctgttcgcccgcacaggcgtaccgcattgccccgaatgc
ggcgagctggtcagcgcgcagacccctcagcagatggtggacacgctgctgaagaacccg
gaacgcacgagattccagattctcgcgcccgttgtacgcggccgcaagggggagttcgcc
gatcttctggagctgctgcgcggcgacggctatgcccgcgcgctgatcgacggtgagggg
cgccagctgtccgacgacatcaagctcaccaagcagaaaaagcacaccatcgaggtcgtg
gtggatcgtctgatgatccgcgacggcatccgacagcggcttactgattcgatcgagacc
gcgctgcggttgtccaaaggtgtcatcgtcgccgatttcgtggacttggacgagaaggac
ccgaatcggcgtcagccgttctcggagcacagggcctgtccgaacgggcatcagctgcag
ttggacgagatcgagccccgcacgttctcgttcaatgcgccatacggggcctgccctgtg
tgcgatggcatcggctacaagctggagatcgaccccgatctggtcatcgccgatgattcc
aagtcgctgtccgacggcgtgatcgagccgtggggaggcggcaagaccacgaccgaatac
tacgggcatgtgctgcagggcctggccgacgaactcgggttctccatggacaccccatgg
cgtgatttgcctgaggacgtgcggcattcgatcctgtacgggcatgatttcaaggtcaac
gtctcataccgcaaccggtgggggcggctgcgcgagtattcgaccggattcgagggtgtc
gtgcgcacgctgatgcgccggtatcacgagaccgactcggaccagatgaagcagtactac
gagtcgtacatgcgcgaggttccctgccaggcgtgcaatggcaggaggctgcgccccgaa
gtgttggcggtcaccgtagacggcgaatccatcgccgatgtatgcgacatgcccgtcgaa
cgcgggctagcgtggatcaatgggctgaaactggagggagcggcggcgacgatcgccggc
gaagtggtcaaggagatccgggcccggctgggattcctcaacgatgtcggcctgaactac
ctgacgctgtcgcgcgcggccaagacgctgtccggcggcgaggcccagcgcatcaggctt
gccacgcagatcggctccggactggtcggcgtcatgtacgtgctcgacgagccatcgatc
ggactgcaccagcgtgacaacgcgcgtctcatcgagacgctgcaccatctgcgcgacctc
ggcaacacgctgattgtcgtcgaacacgaccaggaaaccatcgagagggcggattgggtg
gtcgacatcggacccggtgccggcgagcacggcggcgaggtgatttactccggtccggcg
aagcgtctcatcgaggcgccccggtccgtcaccggcgattacatcgccggccgacggagc
atcgaagtgccggccgtgcggcgcaagccgcatgccacgaagcgccttcgcgtggtgggg
gcaagggagaacaatctgaagaacatcaccgtcgatttcccccttggcgtgatgactgtg
gtcaccggcgtctccggctccggcaaatcgaccctggtgaacacgatcctctacccggtg
ctcgccgacaagctcaacggcgcgcgcatcgtgccgggcaagcacacgcgcgtcgagggc
cttgaccagtgcgacaaggtcatccacgtcgaccagaacccgatcgggcgcactccgcgc
tcgaacccggccacatacaccggcgtgtgggacaagatccgcacgctgttcgctaagacg
ccggaggcgcaggtgcgcggttacggtccggggcggttctcgttcaacgtcaagggcggc
cgctgcgaggcgtgccacggcgacggcacgctcaagatcgagatgaacttcctgcccgac
gtgtacgtcgaatgcgaggaatgccacggcaagcggtacaaccgcgaaaccctggaggtc
aaatacaacggcaagaccgtcgccgacgtgcttgatatgccgatcgaggaggccgccacg
ttcttcaaggcttacccgtcgatctcccgctacctcgacacgctcgtgcaggtcggactg
gggtatattcgcctcgggcagcccgcgcccacgctgtccggcggagagtcgcagcgcgtc
aagctcgccaccgagctgcagcgcaggtccaccggcaagacagtgtatatcctcgacgaa
ccgaccacgggcctgcacttcgaggacgtgcgcaaactgctgctcgtgctgcaggggctg
gtagacaaaggcaataccgtgatcgtcatcgagcacaatctcgacgtggtcaagtccgcc
gactggatcatcgatttgggtccggaaggaggcgacggcggcggcacgattgtcacgcag
ggcacacccgaacaggtggcgcaatgcgaagcgtcctggacgggcaagttcctcaaggac
atgctgtga
DBGET
integrated database retrieval system
