Bifidobacterium bifidum PRL2010: BBPR_1342
Help
Entry
BBPR_1342 CDS
T01340
Symbol
recQ
Name
(GenBank) RecQ ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bbp
Bifidobacterium bifidum PRL2010
Pathway
bbp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBPR_1342 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbp03019
]
BBPR_1342 (recQ)
03400 DNA repair and recombination proteins [BR:
bbp03400
]
BBPR_1342 (recQ)
Enzymes [BR:
bbp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBPR_1342 (recQ)
Messenger RNA biogenesis [BR:
bbp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BBPR_1342 (recQ)
DNA repair and recombination proteins [BR:
bbp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BBPR_1342 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
RQC
Helicase_Sgs1
ResIII
DUF3220
Motif
Other DBs
NCBI-ProteinID:
ADP36392
UniProt:
A0A0H3EB28
LinkDB
All DBs
Position
complement(1579243..1581243)
Genome browser
AA seq
666 aa
AA seq
DB search
MTDQVAALGALKRYFGYDSFRPGQSGLVDAILAGRDVLGVMPTGAGKSVCYQIPATLLPG
VTIVISPLISLMRDQVDALNDAGIPAAYVNTTQGGDEQAMVLAQAAQGDIKLLYVAPERL
ETERFRNFATRVPISLVAVDEAHCVSQWGQDFRSSYLGIGEFIAGLPARPTVAAFTATAT
ERVRRDIIGILGLNAPQVTVTGFDRENLYFDVLKIETKYKAAWVARYVAEHPDESGIVYC
ATRKETEALAAALNHTVPALRGAAGGSAADSVMRDGPVAVAYHGGMPANVRNQAQRDFVT
DAVPVVVATNAFGMGIDKSNVRYVIHHNMPESIEAYYQEAGRAGRDGEPSRCTLLWNESD
IVTRRRLLDMDNDNERLTPEERETVRMSKRRLLDGMIGYCRTTDCLHVYMTRYFGENTSR
TGTCTGGCTNCDSTFETLDVTDIARSISRCVHDAMYDYDDQGRPACGPVRQGLGSGKIVA
ILRGSKAKDLIARHLDRCPSYGRLHDAPEARIRDVLSQMATDGFLSIAEGRLPIVGFGQR
AAETVAPEFRYEIKRVERKAAGAGTGVTSRTDSSSKSAASDGPALGSYAPDDENETLFQK
LRELRLSIARENSLPPYMVFNDRTLRDMARLRPITDAQFLAVNGVGDSKLAKYGKRFMEA
IAGFDD
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgacagatcaggtggcggcgctgggggcgctcaaacggtatttcggctatgactcgttc
cgaccggggcagtcagggctcgtcgacgcgatcctcgccgggcgcgatgtgctcggcgtg
atgccgactggcgctggaaaatccgtgtgctaccagattccggccacgttgctgcccggc
gtcaccatcgtcatctccccgctgatctccctgatgcgcgaccaggtagacgcgctcaac
gacgccggcatcccggccgcatacgtcaacaccacccagggcggcgacgagcaggccatg
gtgctggcgcaggccgcgcaaggcgacatcaaactgctgtatgtggcccccgaacgactg
gaaaccgaacggttccgcaacttcgccacacgcgtgccgatctcgctggtggccgtcgac
gaagcccactgcgtgtcgcaatggggacaggatttccgttcgtcgtacctcggcatcggc
gagttcatcgccggcctgccggcccggccgaccgtagccgcgttcaccgccaccgccacc
gagcgcgtccgccgcgacatcatcggtatcctggggctcaacgccccgcaagtcaccgtc
accggattcgaccgggagaacctgtacttcgatgtgctcaagatcgagaccaaatacaag
gcggcatgggtcgcacgatacgtagccgagcatccggacgaatccggcatcgtctactgc
gccacgcgcaaggagacggaggcactcgccgcggccctcaaccacaccgtgccggcgttg
cgcggagcggcgggcggcagtgcggcagattccgtcatgcgcgatggccccgtcgcggtc
gcctaccacggcggaatgccggccaacgtacgcaaccaggcgcaacgcgacttcgtcacc
gacgccgtgccggtagtcgtcgccaccaatgcgttcggcatgggcatcgacaagtcgaac
gtccgctacgtcatccaccacaacatgccggaaagcatcgaggcatactatcaggaagcc
ggtcgcgccggccgagacggggagccgagccgatgcacactgctgtggaacgaatccgac
atcgtcacccgtcggcgcctgctcgacatggataacgacaacgaacgactgaccccggaa
gagcgcgagaccgtgcgcatgagcaagcgccgtctgctggacggcatgatcggctactgc
cgtaccaccgactgcctgcacgtctacatgacccgctacttcggcgagaacacgtcaaga
accggcacatgcacgggcggttgcacgaattgcgacagcacgttcgaaacccttgacgtg
accgacatcgcgcggtcaatcagccgatgcgtgcacgatgccatgtacgattacgacgat
caggggcgaccggcgtgcggccccgtgcgccaaggcctcggctcggggaaaatcgtggcg
atactgcgcggctccaaggccaaggacctcatcgcgcggcatcttgacaggtgcccgagc
tacggtcgtctgcacgatgcgcccgaagcccgaatccgcgacgtgctcagccagatggcc
accgacggattcctctccatcgccgaagggcggctgccgatcgtcggcttcgggcagcgc
gcggcggaaacggtcgcgcccgaattccgatatgagatcaaacgggtcgagcgcaaggcc
gccggcgccggaacgggcgtgacgtcacggaccgattccagttcgaaatccgcggcgtcg
gacggcccggcattgggctcgtacgcccccgacgacgagaacgagacgttgttccagaaa
ctgcgcgaactgcgtctgtccatcgcccgcgagaacagcctacccccatacatggtgttc
aacgatcgcacgctgcgagacatggcccgtctccgccccatcaccgacgcgcagttcctc
gccgtcaacggcgtgggtgacagcaagctggccaaatacggcaagcgattcatggaggcc
atcgccggcttcgacgattga
DBGET
integrated database retrieval system
