Bifidobacterium bifidum PRL2010: BBPR_1520
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Entry
BBPR_1520 CDS
T01340
Symbol
truB
Name
(GenBank) TruB tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bbp
Bifidobacterium bifidum PRL2010
Brite
KEGG Orthology (KO) [BR:
bbp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbp03016
]
BBPR_1520 (truB)
Enzymes [BR:
bbp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BBPR_1520 (truB)
Transfer RNA biogenesis [BR:
bbp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BBPR_1520 (truB)
Prokaryotic type
BBPR_1520 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ADP36549
UniProt:
A0A0H3EE28
LinkDB
All DBs
Position
complement(1805822..1807114)
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AA seq
430 aa
AA seq
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MGTVPEASGGEQAPIVAAQAAPVAGSAAPATPTSGLLVVDKPRGVTSHDIVAAARGALHM
KKVGHAGTLDPMATGVLVVGFGNATRLLNHIVEHDKTYEATIRLGQSTTTDDADGELLSA
TSPERWQELLALPVAGGPQSAGENGPVNAAKGSAVAAAKVADDGSAYHPHQEAFLPDGQQ
LWRDRIDDIIALQLTGSIEQVPNTFSAIKINGQRAYDLARDGKDVQLKARRITVSAFGVL
DVRFGYAPTRQLGLPLVSAADGRATTERDDAEATPVIDVDVRVSCSAGTYIRALGRDLGA
ALGVGGHLIRLRRTRVGGFDVSSPNVITAHVETREYTDRNGNHQSRNRAVLDVIGDELAG
KALTMLDAARGTMPLLAITDQDAVNLRYGRRIPYDIHGTAAAYLPQSGEVVALVERAKRG
EAKPATVFGA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggggaccgtacccgaagcctcgggcggcgagcaggctccgatcgtggctgcgcaagcc
gcgcctgtggctggctccgccgcgccggcgactcctacgtcgggattgttggtcgtggac
aagccgcgtggcgtcaccagtcatgacatcgtcgcggctgcgcgcggcgcattgcatatg
aaaaaggtggggcacgccggcaccctcgacccgatggccaccggcgtgctggtcgtcgga
ttcggcaacgccacgcggttgctgaaccatatcgtcgaacacgacaagacctatgaggcg
acgattcgcctcggccagtccaccaccaccgatgatgccgatggcgaactgctgtcggct
acctcgcccgagcgctggcaagagctgctggcattgccggtcgccggtgggcctcagtcg
gctggcgagaatgggcctgtgaacgcggccaagggttcggccgtggcagccgcaaaggtc
gcggatgacggctccgcgtatcatccgcatcaggaagcgtttttgccggatggccagcag
ctgtggcgcgaccgtatcgatgacatcatcgcattgcagctcaccggcagcatcgagcag
gtgccgaacacgttctccgcaatcaaaatcaacggtcaacgtgcctatgatctggcccgc
gacggcaaggacgtgcagctcaaggcgcgtcggatcaccgtcagcgcgttcggtgtgctg
gatgtgcggttcggctatgccccgacgcggcagctaggacttccgctcgtctcggcggcg
gacgggcgggcaacgacggaacgggatgacgcggaggcgacgccggtgatcgacgtcgat
gtgcgcgtcagctgctcggcgggcacatatatccgcgcgctcgggcgcgacctgggcgcg
gcgctgggagtcggcgggcacctgatacggctgcggcgcacgcgggtgggcggtttcgac
gtctcctcgccgaatgtcatcaccgcgcacgtggagacacgcgagtacaccgaccgcaac
ggcaaccaccagtcccgcaaccgcgccgtgctcgatgtgattggcgacgagctcgcaggc
aaggcgctgacgatgctggatgccgcgcgaggcaccatgccgctgctcgccatcaccgat
caggacgccgtcaacctgcggtacggccggcgtatcccctatgacatccacggtacggcc
gccgcgtatctgccgcagagcggggaagtggtggcgctcgtcgagcgcgccaagcgtggc
gaggccaagccggccaccgtattcggcgcgtaa
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