Bifidobacterium bifidum PRL2010: BBPR_1631
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Entry
BBPR_1631 CDS
T01340
Symbol
pnp
Name
(GenBank) Pnp Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bbp
Bifidobacterium bifidum PRL2010
Pathway
bbp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBPR_1631 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbp03019
]
BBPR_1631 (pnp)
03016 Transfer RNA biogenesis [BR:
bbp03016
]
BBPR_1631 (pnp)
Enzymes [BR:
bbp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BBPR_1631 (pnp)
Messenger RNA biogenesis [BR:
bbp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BBPR_1631 (pnp)
Transfer RNA biogenesis [BR:
bbp03016
]
Prokaryotic type
tRNA degradation factors
BBPR_1631 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH_2
PCB_OB
DUF1773
S1_2
KH_5
Motif
Other DBs
NCBI-ProteinID:
ADP36655
UniProt:
A0A0H3EEA5
LinkDB
All DBs
Position
complement(1919662..1922325)
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AA seq
887 aa
AA seq
DB search
MEGPEIKAVEAVIDNGSFGKRTLRFETGRLAQQADGAVAAYLDDDSMILSTTTAGSSPKE
NYDFFPLTVDVEEKMYAAGKIPGSFFRREGRPSSEAILACRIIDRPLRPLFPHTLRNEVQ
VVETVLSIDPDDAYDVIALNAASASTMISGLPFEGPVSGVRLALIDGQWVAFPRWSERER
AVFEIVVAGRVIENGDVAIAMIEAGAGKNAWHLIYDEGQIKPDEEVVAQGLEAAKPFIKV
ICEAQNELKEKAAKETKDFQLFPEYTDELYARIDEIAHEDLNEALSIAEKLPRQDRIHEI
KEHVREVLANEFTDMDDAEKEKELGNAFKELQRQIVRRRILTEDYRIDGRGLRDIRTLSA
EVDIVPRVHGSALFQRGETQILGVTTLNMLKMEQQIDALSGPQSKRYMHNYEMPPYSTGE
TGRVGSPKRREIGHGALAEKAIVPVLPSREEFPYAIRQVSEAIGSNGSTSMGSVCASTLS
LLAAGVPLKAPVAGIAMGLVSGDVDGQHVFKTLTDILGAEDAFGDMDFKVAGTSEFITAL
QLDTKLDGIPADILAGALQQAHEARTTILDLINECIDGPAEMSEYAPRIITTTVPVDKIG
EIIGPKGKMINQIQEDTGAEIAIEDDGTVFISSEGGEAAEKAKAIIDQIANPHVPEAGET
YNGKVVKTTSFGAFVNLTPGTDGLLHISQIRNLANGERIDAVEDVLKEGDTVEVVVQGVD
DRGKISLAIPGFEDQENNAGRGRRDDRGDRGDRRGGPRRRSDRDDRRNDRDYDDRPRRSS
RRDDRDDDFDDRPRRRRSDRDYDDRDDRGYDRDDRPRRRSDRDDRDYDRDDRRGGRSDDR
RGGRRGGYDRNPRYATDENYDEYRADRVERSERPRRRVRRDFDPFEN
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcccgaaatcaaggccgtggaggccgttattgacaatggttcgttcggaaaa
cgaaccctgcgcttcgagacgggtcgtctcgcacagcaggcggatggcgcggtggcagcc
tatcttgacgatgattcgatgattctgtccaccaccaccgccggttccagcccgaaggag
aactacgacttcttcccgctgaccgtcgacgtggaggagaagatgtacgccgcgggcaag
atcccgggctcgttcttccgccgtgaaggccgcccgagctccgaggcgatcctggcgtgc
cgtatcatcgaccgtccgctgcgcccgctgttcccgcacacgctgcgcaacgaagtgcag
gtcgtggagaccgtgctgtccatcgatcccgacgacgcctacgacgtcatcgccctgaac
gcggcctccgcttcgacgatgatctccggcctgccgttcgaaggcccggtctccggcgtg
cgtctggcgctgatcgacggccagtgggtcgccttcccgcgctggagcgagcgtgagcgc
gccgtgttcgagatcgtggtcgccggccgtgtcatcgagaacggtgacgtcgccatcgcc
atgatcgaagccggtgccggcaagaacgcctggcacctcatctacgacgagggccagatc
aagccggacgaggaagtcgtcgcgcagggtctcgaagccgccaagccgttcatcaaggtg
atctgtgaagcccagaacgagctcaaggagaaggcagccaaggagaccaaggacttccag
ctgttccccgagtacaccgacgagctgtacgcccgcatcgacgagatcgcccacgaggac
ctcaacgaggcactgtccatcgcggagaagctgccgcgccaggaccgcatccacgagatc
aaggagcacgtgcgtgaggtgctcgcgaacgagttcaccgacatggacgatgccgagaag
gagaaggaactcggcaacgcgttcaaggagctgcagcgccagatcgtgcgccgccgcatc
ctcaccgaggactaccgcatcgacggccgtggcctgcgcgacatccgcaccctgtccgcc
gaggtggacatcgtgccgcgcgtgcacggctccgccctgttccagcgcggcgagacccag
atcctgggcgtcaccacgctgaacatgctcaagatggagcagcagatcgacgcgctctcc
ggcccgcagtccaagcgctacatgcacaactacgagatgccgccgtactccaccggtgag
accggccgcgtcggctccccgaagcgccgcgagatcggccacggcgccctcgccgagaag
gccatcgtgccggtgctgccaagccgcgaggagttcccgtacgccatccgtcaggtctcc
gaggccatcggttccaacggttccacctcgatgggctccgtgtgcgcctccacgctgtcg
ctgctcgccgccggcgtgccgctgaaggccccggtcgcgggtatcgcgatgggtctggtc
tccggtgacgtcgatggccagcacgtcttcaagacgctcaccgacatcctgggcgccgag
gacgcgttcggcgacatggacttcaaggtcgccggcacctccgagttcatcaccgccctg
cagctcgacactaagcttgacggcattccggccgatatcctggctggtgccctgcagcag
gctcacgaggcccgcaccacgatcctcgacctcatcaacgagtgcatcgacggcccggcc
gagatgagcgagtacgccccgcgcatcatcaccaccaccgttccggtcgacaagatcggc
gagattatcgggccgaagggcaagatgatcaaccagatccaggaggacaccggcgccgag
atcgccatcgaggatgacggtaccgtgttcatctcctccgaaggcggcgaagcggccgag
aaggccaaggccatcatcgaccagatcgccaacccgcacgtgccggaagccggcgagacc
tacaacggcaaggtcgtcaagaccacgtcgttcggcgcgttcgtcaacctcaccccgggc
accgacggcctgctgcacatctcgcagatccgcaacctcgccaacggcgagcgcatcgac
gccgtcgaggatgtgctcaaggaaggcgacaccgtcgaggtcgtcgtgcagggcgtggat
gaccgcggcaagatctcgctcgccatccccggtttcgaggaccaggagaacaacgccggc
cgtggtcgtcgtgacgaccgtggcgaccgtggtgaccgccgcggaggcccgcgtcgccgt
tccgaccgcgatgaccgccgtaacgaccgcgactacgacgaccgtccgcgtcgctcctcc
cgccgtgacgaccgcgatgacgatttcgacgatcgcccgcgccgtcgtcgttccgaccgc
gactacgacgaccgtgacgaccgcggctatgaccgcgatgaccgtccgcgtcgccgttcc
gaccgtgacgaccgcgattacgatcgcgacgaccgccgtggcggccgttccgatgatcgc
cgtggtggccgtcgtggcggttacgatcgcaacccgcgttacgcgaccgacgagaactac
gacgagtaccgcgccgaccgcgtggagcgctccgagcgtccgcgccgccgcgtgcgtcgc
gacttcgatccgttcgagaactga
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