Blattabacterium sp. (Blatta orientalis): BLBBOR_189
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Entry
BLBBOR_189 CDS
T02446
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bbq
Blattabacterium sp. (Blatta orientalis)
Pathway
bbq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BLBBOR_189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbq03019
]
BLBBOR_189
03009 Ribosome biogenesis [BR:
bbq03009
]
BLBBOR_189
Enzymes [BR:
bbq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BLBBOR_189
Messenger RNA biogenesis [BR:
bbq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BLBBOR_189
Ribosome biogenesis [BR:
bbq03009
]
Prokaryotic type
rRNA helicases
BLBBOR_189
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
RecG_N
RAP
Motif
Other DBs
NCBI-ProteinID:
AGD98088
UniProt:
L7YAZ8
LinkDB
All DBs
Position
complement(197157..198785)
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AA seq
542 aa
AA seq
DB search
MKTFKDYNFLNDKIIQALEDIGIKTPTPIQKEVIPYLLKSGKDLIALAQTGTGKTAAFGL
PIIQKINLEFRFPQALILCPTRELCIQITRDLSRFSRYISLIKIIPLYGGVSIENQMLSL
QKKTHIIVGTPGRIIDLIERKKLHLSDIKYLVLDEADEMLNMGFKEELDSIIIKLPKKRQ
SLLFSATMSKYMNGIAHNYLIDPIEIITGKRNFASDDVRHIYYIVSNQNKYLALKRIVDI
NPDIYGIIFCKTRKETREIAESLIQDGYNADALYGDLSQSQRESVMNRFRNRILQFLVAT
DIAARGIDVNDVTHVINYNIPDESEIYVHRSGRTGRAGNTGISVCIIHSRETRNLREFEK
KIGKSFERIMIPSGEEVCEKKLFHFIEKVKKVVVDEQSMKTFLPEIQKRLEVFDREELIK
RFSWIEFNRFFSYYKNSKDLNNPIFSYKKNYSVKKKFLSKRVKKESFSKLFLNIGYKDNL
TKLGLINLINQAVNNSRINIGNIEILSNFSLFEVEKRYQKKILIGMSRIHHFGRPISIEI
KN
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacattcaaagattataattttttaaacgataaaattattcaagctttagaagat
ataggaataaaaactcctacacctatacaaaaagaagttattccctatttgttaaaatca
ggaaaagatctaatagcattggcacaaaccggaactggaaaaacagctgcttttggcttg
ccgatcatacaaaaaataaatttagaattccgctttcctcaagcattaattttatgtcct
acaagagaactttgtatacagataacacgtgatctttcccgtttttctagatatatttca
ttaataaaaattatccccttatatggaggggttagcatcgagaatcaaatgctatcttta
caaaaaaagactcacattattgtcgggacgccaggtagaattattgatttaattgaaaga
aaaaaattgcatttatccgatataaaatatttagtacttgacgaggcggatgaaatgttg
aatatggggtttaaagaagaattagattccattataataaaactaccgaaaaaaagacaa
agtcttctattttctgccacgatgtctaaatatatgaatggaatagcacataattactta
atagatcctatagaaattattacaggaaaacgaaattttgcatctgatgatgtgaggcat
atctattatatagtgagcaatcaaaataaatatcttgctttaaaacgtatcgtagatatc
aatccagatatttatggaattatcttttgtaaaactagaaaagaaactagagaaatagca
gagtctttaatacaagacggttataatgcagatgcactttatggagatctttcgcaatca
caacgggaatccgttatgaaccggtttagaaatagaattttacaattccttgtggcgaca
gatatagcggcacgtggaatagatgtaaatgatgtgactcatgtcattaattacaatatt
ccagatgaaagtgaaatctatgtacataggagtggtcgaacaggaagagctggaaatacg
ggaatttctgtttgtattattcattctagagaaactagaaatctacgagaatttgaaaaa
aaaataggaaaaagttttgagagaattatgattccttctggagaagaagtctgtgaaaaa
aaactctttcattttatagaaaaagtaaaaaaagtagtagtggatgaacaatctatgaaa
acatttcttccagaaatccaaaaaagattggaggtatttgatcgagaagaattaatcaaa
cgtttctcttggatagagtttaatcgttttttttcctattacaaaaactctaaggatcta
aacaatcctattttttcgtacaaaaaaaattattctgtaaaaaaaaaatttctctcaaag
agagtgaaaaaagaatctttttcaaaactttttctaaatataggatataaagacaattta
acaaaattaggcctgattaatctaatcaatcaagcagttaataattcacgtattaatatt
ggaaatatagaaattttatccaacttttctttatttgaagtagaaaaacgttatcaaaaa
aaaatattaataggaatgagtagaatccatcattttggaagacctatttctatagagata
aaaaattaa
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