Blattabacterium sp. (Blatta orientalis): BLBBOR_286
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Entry
BLBBOR_286 CDS
T02446
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
bbq
Blattabacterium sp. (Blatta orientalis)
Pathway
bbq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BLBBOR_286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbq03019
]
BLBBOR_286
03016 Transfer RNA biogenesis [BR:
bbq03016
]
BLBBOR_286
Enzymes [BR:
bbq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BLBBOR_286
Messenger RNA biogenesis [BR:
bbq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BLBBOR_286
Transfer RNA biogenesis [BR:
bbq03016
]
Prokaryotic type
tRNA degradation factors
BLBBOR_286
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
OB_Dis3
S1
OB_RNR_1st
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AGD98181
UniProt:
L7Y701
LinkDB
All DBs
Position
complement(275837..277822)
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AA seq
661 aa
AA seq
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MLIDMFFLFMKLENKINKFSGLSNNNLAIGFINITSYGYAFVNIKGFPKDIFIPKKKTNR
AIEGDLVQVKFKNRKSGRKIEGEVIKILKRKRKNFTGILKMESQSQYGLVIVHNNTIHVD
ILIPINEFKGYQHNEKVLVEIVKWPKNFKNPLGKIIKGFGVSGEYKTEIFSLLSEYGISY
EFPKEVEKEAKEIVLKKNSDLNMRRDMRNINTFTIDPLDAKDIDDALSIRKLNSNIWEIG
IHIADVSHYVKKGSFLDKEAYTRANSIYFVGKVIPMLPKILSNDLCSLHPEKDKLSFSSI
FNMNNQGKILKSWFGKTIIRSNRRFTYEEVQKIIERKKGDYHEDISTLFFFSKILTKNRL
KNGAISIEKVEIKFHLDKKNNPTRLYLEKSNEAHRLIEEFMLLANRKISEFVSLNLDGKP
SNRTYIYRVHDEPDFQKIFILKKIIEPLGYFLDLKNVKTSINHLLKSIQGKPEKNMIENL
ILRTMSKAKYSTKNIGHYGLSFVYYTHFTSPIRRYSDIIAHRLLNYYLTKKNNNKLNSIE
FYEEQSKHCSEKERLAIDAEREFLKYLQVKHIKKYLGKEFEGIITGFTEWSVYIDLLVFQ
TEGMIRLRDIKEDLYTLHSNNYSIIGRKKRRVYYLGDRVKVKLIDADIEKKQITLGWIKK
E
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgttaattgacatgttttttttattcatgaaattagaaaataaaatcaataagttttca
ggattatctaataataatttagctattggatttattaatattactagttatggatatgct
tttgtaaatataaaaggatttcctaaagacatttttattcctaaaaagaaaacgaataga
gctatagaaggagacttagtccaagtaaaatttaaaaatcgtaaatcaggaagaaaaata
gaaggagaagtcataaaaattctgaaaaggaaaagaaagaattttactggaatattaaaa
atggaatctcaatctcaatatggattagttatagtacacaacaatactattcacgtggat
atattgattccaatcaacgaattcaaaggatatcaacacaatgaaaaagtattggtagaa
atcgtaaaatggccaaaaaatttcaaaaatcctttaggaaaaataattaaaggatttgga
gtatctggagaatataaaacagaaattttttctttattgtctgaatatggaatatcctat
gaatttcctaaagaggtagagaaagaagcgaaagaaatagtactgaaaaaaaattctgat
ctaaatatgagaagagatatgcggaatattaatactttcactatagatcctcttgatgca
aaagatatagatgacgcactttccattagaaaattaaattctaatatttgggaaattgga
attcatatagccgatgtttctcactatgtaaaaaaaggaagtttcttggataaagaagca
tatacacgtgctaattctatttattttgtaggaaaagttattcctatgcttccaaaaata
ttatccaatgatctttgttctttacacccagaaaaagataaactaagtttttcttccatt
tttaatatgaataatcaaggaaaaattttaaaaagttggtttgggaaaactattatacga
tcaaatagaagatttacatatgaagaagtacaaaaaatcatagaaagaaaaaaaggagat
tatcacgaagatatttctacactattctttttttctaaaattttaaccaaaaatagacta
aaaaatggagcaatttctatagagaaagtagaaataaagtttcatttagataaaaaaaat
aatcctactagattatacttagaaaaaagcaatgaagctcatcgtttgatagaagaattt
atgctattagctaatagaaaaatttcagaatttgttagcttaaatttagatggaaaacct
tctaatagaacctatatttacagagttcatgatgaaccagattttcaaaaaattttcatt
ttaaaaaaaatcatagagcctttaggttattttttagatctaaaaaatgtaaaaacatct
attaatcatttattaaaaagtattcaaggaaaaccagaaaaaaatatgatcgaaaattta
attcttcgaaccatgagcaaggcaaaatattctacaaaaaatataggacactatggatta
tcttttgtttattacacccattttacttctcctattagaagatactcagatatcatagcg
catcgtttattaaattattatttaacaaaaaagaacaacaataaattaaattccatagaa
ttttatgaagaacaatctaagcattgcagtgaaaaagaacgtttagcaatagatgcagaa
agagaatttttaaaatatttacaggttaaacatataaaaaaatacctaggaaaagaattt
gagggaattattacaggatttaccgaatggagtgtttatattgatttactcgtattccaa
acagaaggaatgatccgattacgtgatataaaagaggatttatacactttacattccaat
aattacagtataattggtagaaaaaaaagaagagtttactatttaggagatagagttaaa
gtaaaattgattgacgctgatatagaaaaaaaacaaatcactcttggttggataaaaaaa
gagtga
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