Bordetella bronchiseptica RB50: BB0075
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Entry
BB0075 CDS
T00141
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
bbr
Bordetella bronchiseptica RB50
Pathway
bbr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BB0075 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbr03400
]
BB0075 (uvrA)
DNA repair and recombination proteins [BR:
bbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BB0075 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BB0075 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
nSTAND1
AAA_29
RsgA_GTPase
BCA_ABC_TP_C
AAA_21
AAA_23
AAA_25
AAA_22
nSTAND3
DnaJ_CXXCXGXG
NACHT
MeaB
cobW
Motif
Other DBs
NCBI-ProteinID:
CAE30577
UniProt:
A0A0H3LGB6
LinkDB
All DBs
Position
complement(69874..72732)
Genome browser
AA seq
952 aa
AA seq
DB search
MDAIRIRGARTHNLKNVSLDLPRHQLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLQLMDKPDVDLIEGLSPAISIEQKSAGHNPRSTVGTITEIHDYLRLLYARVGTPYC
PDHGLPLQAQSVGQMVDAVLAWPAEARLAVLAPIARARKGSFEDELASLQAQGFVRLRVD
GQLQEIEQLPALKKTEKHDLDVVIDRLRIRPESQQRLAESFETALQLAEGRAIALDMDSG
REQVFSSRYACPICSHSLAELEPRLFSFNNPMGACPGCDGIGQVGFFDPKRVVAFPELSL
AAGAIRGWDRRNSFTHSLLTSLATHYEFDIDTPFEELPAEVREKVLHGSGEEEIAFFYVN
EKGRSTVKRHPFEGVIPNLERRWRETDSATVREELGKYRNIKTCPDCGGSRLRPEARNVL
IGSEPREGERHGQAIFEVESMPLSVCLDWFRQLQLTGAKQEIAQRIVREIEARLSFLNNV
GLNYLSLDRSADTISGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLIGTLQH
LRDLGNSVIVVEHDEDMIRCADWVVDMGPGAGEHGGQVVAQGTPEAVQTDPQSLTGQYLS
GARAIEIPARRPVADDQPWLHLSGATGNNLKSVDLRIPAARLVCVTGVSGSGKSTLVNDT
LAVALARQLNHAQGEPAPYAGLAGLEHFDKTISVDQSPIGRTPRSNPATYTGLFTPIREL
FAGVPEARARGYDPGRFSFNVKGGRCEACQGDGVVKVEMHFLPDMYVPCDVCHGKRYNRE
TLEIRYRGRNISEVLDLTVEQALEYFESVPAIARKLHTLIDVGLSYIRLGQSATTLSGGE
AQRVKLSLELSRRSTGRTLYILDEPTTGLHFHDIELLLKVLNQLVDSGNTVLIIEHNLDV
IKTADWLVDMGPEGGDGGGRVVAQGTPEQVAASPDSHTGHYLGRVLRNGKRR
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgattcgcattcggggtgcgcgcacccacaatctcaagaacgtctcgctggac
ctgccgcgccaccagttggtcgtggtgacgggcctgtccggttcgggcaagtcgtcgctg
gcgttcgacacgctgtatgcggaaggccagcgtcgctacgtggaaagcctgtcggcatac
gcgcgccagttcctccagctgatggacaagcccgatgtcgacctgatcgaaggcctgtcg
ccggcgatctccatcgagcagaagtcggcgggccacaatccgcgctcgaccgtgggcacc
atcaccgagatccacgactacctgcgcctgctgtacgcacgggtgggcacgccctactgc
cccgaccacgggctgccgctgcaggcgcaaagcgtcggccagatggtcgacgccgtgctg
gcctggccggccgaggcgcgcctggccgtgctggcgcccattgcgcgggcccgcaagggc
agcttcgaggacgaactggccagcctgcaggcgcagggcttcgtgcggctgcgggtcgat
ggccagctgcaggaaatcgagcagctgcccgcgctgaagaaaaccgagaaacacgacctg
gacgtggtcatcgaccgcctgcgcatccgccccgaaagccagcagcgcctggccgagagt
ttcgagaccgcgctgcagctggccgaaggccgcgccatcgcgctggacatggacagcggc
cgcgaacaggtgttctccagccgttacgcctgcccgatctgcagccacagcctggccgag
ctggagccgcggctgttcagcttcaacaatcccatgggcgcctgtcccggttgcgacggc
atcggccaggtaggctttttcgaccccaagcgcgtggtggccttcccggagctgagcctg
gccgccggcgcgatccgcggctgggaccgccgcaactccttcacccactccctgctgacc
agcctggccacccattacgaattcgacatcgataccccgttcgaggagctgccggccgaa
gtgcgcgagaaggtactgcacggctcgggcgaggaagagatcgccttcttctatgtcaat
gaaaagggccgcagcacggtcaagcgccacccgttcgaaggcgtgatcccgaacctggag
cgccgctggcgcgaaaccgactcggccacggtgcgcgaggagctgggcaagtaccgcaac
atcaagacctgcccggactgcggcggctcgcgcctgcgtcccgaggcgcgcaacgtgctg
atcggcagcgagccgcgcgagggcgaacgccatggccaggcgatcttcgaggtcgagagc
atgccgctgtcggtgtgcctggactggttccgccagctccagctgaccggcgccaagcag
gagatcgcgcagcgcatcgtgcgcgagatcgaggcccgtctcagcttcctgaacaatgtc
ggcctgaactacctgtcgctggatcgcagcgccgatacgatctcgggcggcgaagcccag
cgcatccggctggccagccagatcggctcgggcctgaccggcgtcatgtatgtgctggac
gagccatccatcggcctgcaccagcgcgacaacgaccggctgatcggcaccctgcagcac
ctgcgcgacctgggcaacagcgtcatcgtggtcgagcacgacgaggacatgatccgctgc
gccgattgggtggtcgacatgggcccgggcgccggcgagcacggcggccaggtggtggcg
cagggcacgccggaggcggtgcagaccgacccgcaatcgctcaccggccagtacctgagc
ggcgcgcgcgccatcgagatcccggcgcgccggccggtcgccgacgaccagccctggctg
cacctgtccggggccaccggcaacaacctcaaatcggtcgatctgcgcatcccggcggcg
cgcctggtgtgcgtcaccggcgtctcgggctcgggcaaatccaccctggtcaacgatacg
ctggcggtggcgctggcgcgccagctcaaccatgcgcaaggcgagccggcgccctatgcc
ggcctggccgggctggagcacttcgacaagaccatcagcgtggaccaaagcccgatcgga
cgcacgccgcgcagcaaccccgccacgtacaccgggctgttcacgcccatccgggaactg
ttcgccggcgtgcccgaagcgcgcgcgcgcggctacgacccgggccgtttcagcttcaac
gtcaagggcggacgctgcgaagcctgccagggcgatggcgtggtcaaggtcgagatgcat
ttcctgccggacatgtacgtgccgtgcgacgtctgccacggcaagcgctacaaccgcgag
acgctggaaatccgctaccgcggccgcaacatcagcgaagtgctggacctgacggtcgaa
caggcgctggaatatttcgaatcggtgcccgccattgcgcgcaagctgcacacgctgatc
gatgtgggcctgtcgtacatccggctggggcaaagcgctaccacgctgtccggcggcgag
gcgcaacgggtcaagctgtcgctggaactgtcgcgccgcagcacgggccgcaccctgtac
atcctggacgagccgaccaccggcctgcacttccatgacatcgagctcttgctcaaggtc
ctcaaccaactggtcgacagcggcaatacggtactgatcatcgagcacaacctcgacgtc
atcaagaccgccgactggctggtggatatggggccggaaggcggcgacggcggcggacgc
gtggtcgcgcagggcacgcccgagcaggtggcggccagccccgacagccacaccggccac
tacctggggcgggtattgcgcaacggcaaacggcgctag
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