Bordetella bronchiseptica RB50: BB1806
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Entry
BB1806 CDS
T00141
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase [NADP+]
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
bbr
Bordetella bronchiseptica RB50
Pathway
bbr00250
Alanine, aspartate and glutamate metabolism
bbr00310
Lysine degradation
bbr00350
Tyrosine metabolism
bbr00650
Butanoate metabolism
bbr00760
Nicotinate and nicotinamide metabolism
bbr01100
Metabolic pathways
bbr01120
Microbial metabolism in diverse environments
Module
bbr_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
bbr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
BB1806 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BB1806 (gabD)
00310 Lysine degradation
BB1806 (gabD)
00350 Tyrosine metabolism
BB1806 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
BB1806 (gabD)
Enzymes [BR:
bbr01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
BB1806 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
BB1806 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
BB1806 (gabD)
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GFIT
Motif
Pfam:
Aldedh
Pectinesterase
Motif
Other DBs
NCBI-ProteinID:
CAE32303
UniProt:
A0A0H3LLT8
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All DBs
Position
complement(1905790..1907259)
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AA seq
489 aa
AA seq
DB search
MTQLTQPLSRAELLRDACYIDGKWVGAGNGPSIPVDNPSTGKTIISVPKLGRKEAEQAID
AAEAALPAWSARTGKERAAILLKWAQLMMENQQDLAVIMTSEQGKPVAEAAGEIAYAASF
LEWFAEEAKRIDGDILQSPKGGQRLMVLKQPIGVTAAITPWNFPAAMITRKVGPALAAGC
TMVVKPAQQTPLTALALAVLAEQAGVPAGVFQVVTGSSREIGAALCESEVVRKLSFTGST
EVGRTLMEQCAPTIKKLSLELGGNAPFIVFDDADLDRAIDGILASKYRNAGQTCVCANRI
YVQAGVYEEVAKRLVEKVNAMKVGDGFEQGVTQGPLIDTAAVAKVQEHIADATAHGAKVI
AGGQPHALGGSFFQPTVVRDVTQSMRFAVEETFGPVAPLFKFESEDEVIGMANNTIFGLA
AYFYTRDYARIWRVSEALEYGIVGINTGIISNEVGPFGGVKQSGLGREGSKYGIEDYLEL
KYLCVDLGA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagttgacccaacccctgagccgcgccgaactgctgcgcgacgcctgctacatc
gacggaaagtgggtaggcgccggcaacggcccgtccatcccggtcgataacccgtccacc
ggcaagaccatcatctcggtgcccaagctgggccgcaaggaagccgagcaggccatcgac
gccgccgaggccgccctgcccgcctggagcgccaggaccggcaaggagcgcgccgcgatc
ctgctgaagtgggcccagctgatgatggaaaaccagcaggacctggccgtcatcatgacg
tccgagcaaggcaagcccgtagccgaggccgccggcgagatcgcctacgccgcgtccttc
ctggagtggttcgccgaagaagccaagcgcatcgacggcgacatcctgcaaagccccaag
ggcggccagcgcctgatggtgctcaagcagcccatcggcgtgaccgccgccatcacgccg
tggaacttcccggccgccatgatcacccgcaaggtcggcccggccctggccgccggctgc
accatggtggtcaagccggcccagcagacgccgctgaccgcgctggcgctggccgtgctg
gccgagcaggccggcgtgccggccggcgtgttccaggtcgtgaccggcagctcgcgtgaa
atcggcgcggccctgtgcgaaagcgaagtggtacgcaagctgagcttcaccggctcgacc
gaagtcggccgcacgctcatggagcaatgcgcgcccaccatcaagaaactgtcgctggaa
ctgggcggcaacgcgccgttcatcgtgttcgacgacgccgacctggatcgcgccatcgac
ggcatcctggcctccaagtaccgcaacgccggccagacctgcgtatgcgccaaccgcatc
tacgtgcaggccggcgtctacgaggaagtggccaagcgcctggtcgagaaggtcaacgcc
atgaaggtgggcgacggcttcgaacagggcgtcacccagggcccgctgatcgacaccgcc
gccgtggccaaggtgcaggaacacatcgccgacgccaccgcgcacggcgccaaggtcatc
gccggcggccagccgcatgcgctgggcggcagcttcttccagcccacggtggtgcgcgac
gtcacgcagtcgatgcgctttgccgtcgaggaaaccttcggcccggtcgccccgctgttc
aagttcgaaagcgaagacgaagtcatcggcatggccaacaacaccatcttcggcctggcc
gcctacttctacacgcgcgactacgcccggatctggcgcgtctccgaagcgctggaatac
ggcatcgtcggcatcaacaccggcatcatctccaatgaagtcggcccgttcggcggcgtc
aagcaatccggcctgggccgcgaaggctcgaagtacgggatcgaggactacctcgagctg
aaatacctctgcgtggacctgggcgcctga
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