Bordetella bronchiseptica RB50: BB1851
Help
Entry
BB1851 CDS
T00141
Name
(GenBank) putative exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bbr
Bordetella bronchiseptica RB50
Pathway
bbr03030
DNA replication
bbr03430
Mismatch repair
bbr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BB1851
03430 Mismatch repair
BB1851
03440 Homologous recombination
BB1851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbr03032
]
BB1851
03400 DNA repair and recombination proteins [BR:
bbr03400
]
BB1851
Enzymes [BR:
bbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BB1851
DNA replication proteins [BR:
bbr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BB1851
DNA repair and recombination proteins [BR:
bbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BB1851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CAE32348
UniProt:
A0A0H3LQZ6
LinkDB
All DBs
Position
1959184..1959927
Genome browser
AA seq
247 aa
AA seq
DB search
MPQMSYILYKTCLAAHRGLSRRRMPAGPAGRCFYCCFGINMAYFRRYTTPHPYGQTLRAG
AAAGRASAARDGLRALDGPFVVADLETTGLSVATCEILEFAAVRVSACGQIEREFTQVVR
TDGRVPPFISRLTGITQAEVERDGVPVRQAFGDFLDFIEGGPLFFHNASFDRRFLQAAAD
RTGLPFEAQTHCTLMLARQAWPELPSHKLNVLARHLGASEPTHRALADVRTTVAVALAAR
ARLAAQG
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaaatgtcttatatcttatataagacttgcctggcagcacatcggggcctatcc
cggcgtagaatgcccgctggacccgcagggcgttgtttttattgttgtttcggtatcaat
atggcctatttccgtcgctacaccacgccccatccctatgggcagaccctgcgcgctggc
gccgcggccggccgcgccagcgccgcgcgcgacggcttgcgggcgctggatgggccgttc
gtggtggccgacctggaaaccaccgggctgtccgttgccacgtgcgaaatcctcgaattc
gccgccgtgcgcgtcagcgcatgcgggcagatcgagcgcgagttcacccaggtggtgcgc
accgacggcagggtgccgccgttcatttcgcgcctgaccggcatcacccaggccgaagtc
gagcgcgatggcgtgccggtgcggcaggcgttcggcgacttcctcgacttcatcgagggc
gggccgctgtttttccataacgcttcgttcgatcgccgcttcctgcaggccgcggccgat
cgcaccggcctgccgttcgaggcgcagacccattgcacgctgatgctggcgcgccaggcc
tggcccgagctgccgtcgcacaagctgaacgtgctggcccgccatctcggcgcgtccgag
ccgacccaccgggccctggccgacgtgcgcaccaccgtggccgtggcgttggctgcgcgt
gcgcggctggcggcgcagggctga
DBGET
integrated database retrieval system
