Bordetella bronchiseptica RB50: BB2638
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Entry
BB2638 CDS
T00141
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bbr
Bordetella bronchiseptica RB50
Pathway
bbr03030
DNA replication
bbr03430
Mismatch repair
bbr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BB2638 (holB)
03430 Mismatch repair
BB2638 (holB)
03440 Homologous recombination
BB2638 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbr03032
]
BB2638 (holB)
03400 DNA repair and recombination proteins [BR:
bbr03400
]
BB2638 (holB)
Enzymes [BR:
bbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BB2638 (holB)
DNA replication proteins [BR:
bbr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BB2638 (holB)
DNA repair and recombination proteins [BR:
bbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BB2638 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
CAE33131
UniProt:
A0A0H3LMP2
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All DBs
Position
2799285..2800337
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AA seq
350 aa
AA seq
DB search
MSLGRFLPWQTEIARSWLSGRDRFAHAWLIHGNGGIGKLDFAAAAAASLLCESPRQGLAC
GECAACAWVASGNHPDLRRIRPEAVALEEGADQTEGAEEAEAGSGGAAAKRAPSKDIRID
QIRALEPWFNTATHRGGWRVALLYPAHALNVISANALLKVLEEPPAHTVFLLVADAPDRL
LPTLVSRCRRLPLPTPSAGQALQWLGEQGVEPAADWLAAAGGAPLAAQRLAARGDAPCPA
WLAQLVQPLAAGKAPDVGMLTENLEKVAAAEWIDALQRLFTDLTLAAHGAASRYYPSLAE
PVRQAAARAQPAQLAETARWLSRQRGLATHPLNAKLFVHAALQRVVLSCQ
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcggtcgcttcctgccctggcagacggagatcgcccgctcctggctgagcggg
cgcgaccgcttcgcgcatgcctggctgatccatggcaatggcggcatcggcaagctggac
tttgcggcggccgcggcggccagcctgctgtgcgagtcgccgcgccagggcctggcgtgc
ggcgagtgcgcggcctgcgcctgggtggccagcggcaaccatccggatctgcggcgcatt
cgtccggaggcggtcgcgctggaagagggcgccgaccagaccgaaggcgccgaggaggcc
gaggccggttccggcggcgcggcggccaagcgcgcgccgtccaaggacatccgcatcgac
cagatccgcgcgctcgaaccgtggttcaacaccgccacgcaccggggcggctggcgcgtg
gcgctgctgtatccggcgcatgcgctgaacgtgatatcggccaacgccttgctgaaggtg
ctggaggagccgcccgcgcatacggtgttcctgctggtggccgatgcgcccgaccgcctg
ctgcccacgctggtgtcgcgctgccggcgcctgccgctgcccacgccgtcggccgggcag
gcgctgcaatggctgggcgagcagggcgtggagccggcggccgactggctggctgccgcc
ggcggcgcgccgctggcggcgcagcgcctggcggcccggggcgatgcgccgtgcccggcc
tggctggcgcaactggtgcagcccttggccgcgggcaaggcgcccgatgtgggcatgctg
accgaaaacctggaaaaggtggcggcggccgagtggatcgacgccctgcagcgcctgttc
accgacctgacgctggccgcccatggcgcggccagccgctactatccctcgctggccgag
ccggtgcggcaagccgccgcgcgcgcgcagcccgcgcaactggccgagaccgcgcgctgg
ctgagccgccagcgcgggctggccacgcatccgctcaacgccaagctgttcgtgcacgcg
gccctgcagcgcgtggtgctatcctgccagtga
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