Bordetella bronchiseptica RB50: BB2859
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Entry
BB2859 CDS
T00141
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
bbr
Bordetella bronchiseptica RB50
Pathway
bbr02020
Two-component system
bbr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bbr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BB2859 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BB2859 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbr03021
]
BB2859 (rpoN)
Transcription machinery [BR:
bbr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BB2859 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DUF3208
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
CAE33351
UniProt:
A0A0H3LWF6
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All DBs
Position
3021666..3023114
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AA seq
482 aa
AA seq
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MFPRPGASLSEENLSHVLQDLRLRQQTTLAPRLQQSIHLLQMSALEFTTTVQQALATNPF
LEDADETEAQDDAPAPPAASEPPATSEPPPEPPSYAGDYPTRSAAAQPGVASDAAAWVPA
TLSLHERLSQALGAYVLSERDRALAEFIVDGLDDDGYLRQELAQLAGVADFDPPPEASEW
QAALHLVQQLDAPGLAARDLPECLALQIRACSRLDPAVRDAALAIVAAHLPRLARSDYPG
MRRALRCSEPVLRQACGVIRGLDPKPGRRYAHEPPSYVVPDVVVSKQRQQWLVVPNRGAM
PHARLHQAYADLFRRARMDERSPMAQELQEARWLVRNVEQRYATIRRVAEAIVQRQQMFF
EFGQIALRPLMLREVADELEMHESTVSRATANKYMSTPRGVFEFRHFFSRELSTESGGTC
SAAAVRALIREYIDAEDPRMPLSDVTLAERLAGDGIVVARRTVSKYRLQLRLPAADARRQ
YY
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgcgcccaggcgcgtccctgtcggaggaaaacttgagccacgtcctgcaggat
ctgcggctgcgccagcaaaccacgctggcgccacgcctgcagcagtccattcatttgctg
caaatgtcggcgctggagttcaccacgacggtgcaacaggccctggcgaccaatccgttc
ctggaggacgccgacgagaccgaagcgcaggacgacgcgccggcgccgcccgcagcgtcc
gagccgcccgcgacatccgagccgccgcccgagccgccctcctatgccggcgactatccc
acgcgcagcgccgccgcccagcctggcgtggccagcgacgcggcggcctgggtgccggcc
accctgagcctgcacgaacgcctgtcgcaggcgctgggcgcctatgtgctgagcgaacgc
gaccgtgcgctggccgagttcatcgtggatggactggatgacgacggctacctgcggcag
gaattggcccaattggccggcgtcgccgatttcgacccgccgcccgaggccagcgaatgg
caggcggcgctgcacctggtccagcaactcgatgcgccgggcctggccgcgcgcgacctg
cccgaatgcctggccctgcagatccgcgcctgtagccggctcgatccggccgtgcgcgac
gccgccctggccatcgtcgccgcccacctgccgcgcctggcgcgcagcgattaccccggc
atgcggcgcgcgctgcgctgcagcgaaccggtgttgcgccaggcgtgcggggtgatccgc
ggcctcgaccccaagcccggccgccgctatgcgcacgaaccgcccagctacgtcgtgccg
gatgtggtggtcagcaaacagcgccagcaatggctggtggtgccgaatcggggcgccatg
ccgcatgcccggctgcaccaggcctatgccgacctgttccggcgcgcccgcatggacgag
cgcagcccgatggcgcaggagctgcaggaagcccgttggctggtgcgcaatgtcgagcaa
cgctacgccaccatccggcgcgtggccgaggccatcgtgcagcgccagcagatgttcttc
gagttcggccagatcgcgctgcggccgctgatgctgcgcgaggtggccgacgagctggag
atgcacgagtccacggtctcgcgcgccaccgccaacaagtacatgtcgacgccgcgcggg
gtgttcgagttccgccattttttctcgcgcgaactgagcaccgagtcgggcggcacgtgt
tcggccgcggccgtgcgcgcgctgatccgcgaatacatcgacgcggaagacccgcgcatg
cccttgtcggatgtgaccctggccgaacggctggccggcgacggcatcgtggtggcgcgc
cgcacggtgtccaagtaccggctgcagctgcgcctgcccgccgccgacgcgcgccgccag
tactactga
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