Bordetella bronchiseptica RB50: BB3014
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Entry
BB3014 CDS
T00141
Name
(GenBank) conserved hypothetical protein
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bbr
Bordetella bronchiseptica RB50
Brite
KEGG Orthology (KO) [BR:
bbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bbr03009
]
BB3014
Enzymes [BR:
bbr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BB3014
Ribosome biogenesis [BR:
bbr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BB3014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
TRAM
RrnaAD
Methyltransf_31
Methyltransf_32
Methyltransf_23
TRM5-TYW2_MTfase
Methyltransf_11
PCMT
DOT1
Motif
Other DBs
NCBI-ProteinID:
CAE33506
UniProt:
Q7WI42
LinkDB
All DBs
Position
complement(3218416..3219816)
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AA seq
466 aa
AA seq
DB search
MVDVLNIESLDLEARGIAHRDGKVLFVEGALPGERVTVQTVRRKPSYEIAKVEEILRPSS
QRVAPRCPHFGVCGGCAMQHLAPAAQVAIKQRALEDTFWHVGKLKPARILPPLYGPTWGY
RYRARLSVRVVPKKGGVLVGFHERKSSYVADMRECHVLPPAVSRLLLPLRAMIAAMSAPD
RMPQIEVALGDEAIVLVLRHLLPLTDGDIAVLRAFAAEHGVQWWLQSKGPDTVHPLEREH
ADALAYTLPEFGLRMPYRPTDFTQVNHAINRAMVSRALKLLDVQPQDRVADLFCGLGNFT
LPLATQGREAVGVEGSKALTDRAHEAAARHGLGERTRFATLNLFEVDVQWLRGLGYFDRM
LIDPPREGAQAVAQALSLLAPGERPRRIVYVSCNPGTLARDAAIMVHEGGYALRSAGVIN
MFPHTGHVESIAVFESLDEATVLQAQAQARQKAREEAERLAEAAAA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacgttttgaatattgagtccctggacctcgaggcccgggggatagcccaccgt
gacggcaaagtgctgttcgtggaaggcgccttgcccggcgagcgggtcacggtgcagacg
gtgcgccgcaagccgtcctatgagattgccaaggtcgaggagatcctgcgcccgtcctcg
cagcgcgtggcgccgcgctgcccgcatttcggcgtttgcggcggctgtgccatgcagcac
ctggcgcccgcggcccaggtcgccatcaagcagcgcgcgctcgaagacactttctggcac
gtgggcaagctcaagccggcgcgcatcctgccgccgctctatggcccgacctggggctac
cgctatcgcgcccgcctgtcggtgcgcgtcgtgcccaagaagggcggggtgctggtgggc
tttcatgaacgcaagagcagctacgtggccgacatgcgcgaatgccatgtgctgccgccg
gcggtcagccgcctgctgctgcccctgcgcgccatgatagcggccatgtcggcgccggac
cgcatgccccagatcgaggtcgcgctgggcgatgaggcgatcgtgctggtgttgcgccac
ctgttgccgctgaccgacggcgatatcgccgtgctgcgcgcgtttgccgccgagcacggg
gtgcagtggtggctgcagtccaagggcccggataccgtgcatccgctggagcgcgagcat
gccgacgcgctggcctataccctgccggagttcgggctgcgcatgccttaccggccgacg
gatttcacccaggtcaaccacgccatcaaccgcgccatggtgtcgcgcgccctgaagctg
ctggatgtgcagccgcaggaccgcgtggcggacctgttctgcggcctgggcaatttcacg
ttgccgctggccacccaggggcgcgaggcggtgggggtggagggcagcaaggcgctgacc
gaccgcgcgcacgaggcggcggcgcgtcatgggctgggcgagcgcacccgtttcgccacg
ctcaacctgttcgaggtcgatgtgcaatggctgcgcgggctgggctacttcgaccgcatg
ctgatcgacccgccgcgggaaggcgcgcaggctgtcgcgcaggcgctgtcgctgctggcc
cccggcgagcggccgcgccgcatcgtgtacgtctcctgtaatccgggcaccctggcgcgc
gacgccgccatcatggtgcacgaaggcggctatgcgctgcgcagcgctggcgtcatcaac
atgttcccgcataccggccatgtcgaatcgatcgcagtgttcgagtcgctcgacgaggcg
acggtgctgcaagcgcaggcacaggcgcggcagaaggcgcgcgaggaggccgagcgcctt
gccgaggcggccgctgcctga
DBGET
integrated database retrieval system
