Bordetella bronchiseptica RB50: BB3126
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Entry
BB3126 CDS
T00141
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
bbr
Bordetella bronchiseptica RB50
Brite
KEGG Orthology (KO) [BR:
bbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbr03000
]
BB3126 (prpR)
Transcription factors [BR:
bbr03000
]
Prokaryotic type
Helix-turn-helix
Other families
BB3126 (prpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
HTH_23
PAS_4
PAS
PAS_8
AAA_5
Mg_chelatase
AAA_2
AAA
HTH_28
PAS_9
PAS_7
HTH_Tnp_ISL3
HTH_29
AAA_3
HTH_17
AAA_16
Diguanyl_cycl_sensor
HTH_30
HTH_Tnp_1_2
NACHT
HTH_1
HTH_11
Motif
Other DBs
NCBI-ProteinID:
CAE33618
UniProt:
A0A0H3LNZ5
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Position
3334857..3336785
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AA seq
642 aa
AA seq
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MPALSAAQPLPRLCFVSYRQIREFAAPVIAEYRNRAAIDVVDGTFADALAVARDRIERNA
VDAFISAGANASILRANLQAPVATIQLGGFDLLQALIRARRIASRVGVVMYGQTLPELDA
VKELLNIEITQYAYQTPYHARQGFEQLRRDGFQVIVGSSLVVELAEEAGLRGILAYSLAS
IRQGFEDAIELARVARLEAGRYEQLNGVLHNLQEAVLAVDRDHRIIAVNPPMRELLGMPN
RTLLGQRLDAVEPELSLQPTLDSGRAERAAVQRYARRDWIANRTPILEYGKLVGAALTLY
DAHRIQEADSSLRMQQRRRQSAARHRFDTLLGQSPAFMRAVDTARRYAGTDLRVLIQGES
GVGKELFAQSIHNASARAHRPFVAINCASLPETLLESELFGYEDGAFTGSRRDGKRGLIE
AAHTGTLFLDEIGDMPLSLQTRLLRVLQEGEITRLGATTPVPVDVRVLAATHQPLQELVA
QRRFRQDLYYRINALRLPLPPLRERGADIALLATRLVARCLDRLGSPLDAEAALAALLPR
LAAYPWPGNVRELENLCERIAVFLLQFDDAEAIRHDALRHECPELFEHPAAMDAPRPERI
AQALRQADGNRAQAAAQLGVSRSTLWRWLRQIDAADDGARAT
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgctttccgccgcgcagcccctgccgcgcctgtgcttcgtcagctaccgccag
atccgcgaattcgccgccccggtgatcgccgaataccgcaaccgggccgccatcgacgta
gtggacggcaccttcgccgatgccctggcggtcgcgcgcgaccgcatcgagcgcaatgcg
gtcgacgccttcatcagcgcgggcgccaacgccagcatcctgcgcgccaacctgcaggcc
ccggtggccaccatccagctgggcggcttcgatctgctgcaggccctcatccgggcgcgg
cgcatcgctagccgggtcggggtggtcatgtacggccagacgctgcccgagctcgatgcc
gtcaaggagctgctcaatatcgagatcacccagtacgcctaccagacgccatatcacgcc
cgccagggcttcgaacagctgcggcgcgacggcttccaggtgatcgtgggctccagcctg
gtggtcgagctggccgaggaagcgggcctgcgcggcatcctcgcctattcgctggcgagc
atacgccaggggttcgaggacgccatcgagctggcgcgcgtggcgcgcctggaggccggc
cgctacgagcagctcaatggcgtgctgcacaacctgcaggaggcggtgctggcggtcgac
cgcgaccaccgcatcatcgccgtcaatccgcccatgcgcgagctgctgggcatgcccaac
cgcacgctgctgggacagcgcctggatgccgtcgaacccgagctgtcgctgcagcccacg
ctggactcgggccgggccgagcgcgccgccgtgcagcgctacgccaggcgcgactggatc
gccaatcgcacgcccattctcgagtacggcaagctggtcggcgccgccctgaccctgtat
gacgcgcaccgcatccaggaggccgacagcagcttgcgcatgcagcaacgccgtcgccag
agcgcggcccgccaccgcttcgacaccctgctcgggcaaagccccgcgttcatgcgcgcc
gtcgacaccgcgcgccgctacgccggcaccgacctgcgcgtgctgatccagggcgaaagc
ggcgtcggcaaggagctgttcgcccagtcgatccacaacgccagcgcgcgcgcccaccgc
cccttcgtcgccatcaattgcgcgtcgctgcccgaaaccctgctcgagagcgaactgttc
ggctacgaggacggcgccttcaccgggtcgcgccgcgacggcaagcgcggcctgatcgag
gccgcgcatacgggcacgctgtttctcgatgagatcggcgacatgccgctgtcgctgcag
acgcgcctgctgcgcgtgctgcaggaaggcgaaatcacgcgcctgggcgccaccacgccg
gtgccggtggacgtgcgcgtgctggccgccacccatcagccgctgcaggagctggtggcc
cagcgacgcttccgccaggatctgtactaccgcatcaacgccctgcggctgccgctgccg
cccttgcgcgagcgcggcgccgacatcgccttgctggcgacccgcctggttgcgcgctgc
ctggaccggctgggctcgcccctggacgccgaggccgcgctcgccgccctgctgccgcgg
ctggccgcctatccctggccgggcaacgtgcgcgagctggagaacctgtgcgagcggatc
gcggtgttcctgctgcagttcgacgacgccgaggcgatccgccatgacgccttgcgccac
gaatgccccgagctgttcgagcaccccgccgccatggacgcgccgcgtccggagcgcatc
gcgcaggccctgcgccaggccgatggcaatcgcgcacaggccgccgcgcagctgggcgtg
agccgctcgacgctgtggcgctggctcaggcagatcgacgccgccgacgatggcgcgcgc
gcgacttga
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