Bordetella bronchiseptica RB50: BB3386
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Entry
BB3386 CDS
T00141
Name
(GenBank) putative ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
bbr
Bordetella bronchiseptica RB50
Brite
KEGG Orthology (KO) [BR:
bbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbr03019
]
BB3386
03009 Ribosome biogenesis [BR:
bbr03009
]
BB3386
Messenger RNA biogenesis [BR:
bbr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BB3386
Ribosome biogenesis [BR:
bbr03009
]
Prokaryotic type
rRNA processing factors
BB3386
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
CAE33878
UniProt:
A0A0H3LPH1
LinkDB
All DBs
Position
3623214..3624677
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AA seq
487 aa
AA seq
DB search
MTEDILINVTPFETRVALVEQGAVQELHVERSVQRGHVGNIYLGRVVRVLPGMQSAFIDI
GLERAAFIHIADLRENRSERSQGQTPTPIEKLLFEGQTLMVQVIKDPLGTKGARLSTQIS
IAGRMLVYLPHDPHIGISQKIDSESERTQLRERLQALMPPEEKGGFIVRTQAEGATDEEI
AADLEYLRKLWASVQAAARSQPAPTALHQDLTLGQRVLRDMVGPHTGTILVDSRSTSSAL
QEWARVYTPSVAERIRHYSGERPLFDTANVDEEIARALSRRVDLKSGGYLIVDQTEALTT
VDVNTGGFVGGRNFDDTIFKTNLEAAQAIARQLRLRNLGGIVILDFIDMEDPDHRETVLA
ELKKALSRDRTRMTVNGFTQLGLVEMTRKRTRDSLAHQLCEPCPMCQSRGNVRTARTVCY
EILREILREARQFNPREFRILAAQGVVDLFLEEESQHLAMLGDFVGKQISLEVESQYSQE
QYDIILI
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagacatcctgatcaacgttaccccgtttgagacccgcgtcgccctggtggag
caaggcgccgtgcaggaactacatgtagagcgcagcgtccagcgcggccacgtgggcaat
atctatctgggccgcgtcgtgcgcgtgctgccgggcatgcagagcgccttcatcgatatc
ggcctggagcgcgccgccttcatccatatcgccgacctgcgggagaaccgcagcgaacgc
agccagggccagacgcccacgccgatcgagaagctgctgttcgaggggcagaccctgatg
gtgcaggtcatcaaggacccgctgggcaccaagggcgcgcggctgtccacgcagatcagc
atcgccggacgcatgctggtgtacctgccgcacgatccccacatcggcatttcgcaaaag
atcgattccgagtccgaacgcacccagttgcgcgagcgcctgcaggcgctgatgccgccg
gaggagaaaggcggcttcatcgtgcgcacgcaggccgaaggagccaccgacgaggaaatc
gccgccgacctcgagtacctgcgcaagctgtgggccagcgtgcaagcggccgcgcgcagc
cagcccgcccccacggccctgcaccaggacctcacgctcggccagcgcgtattgcgcgac
atggtcggcccgcataccggcaccatcctggtcgattcgcgcagcaccagcagcgccctg
caggaatgggcgcgggtgtatacgccttcggtggccgagcgcatccgccactacagcggc
gagcgcccgctgttcgacacggccaacgtcgacgaggaaatcgcacgcgcgctgtcgcgc
cgggtcgacctcaagtcgggcggctacctgatcgtggaccagaccgaggcattgaccacg
gtggacgtcaataccggcggcttcgtgggcgggcgcaacttcgacgacaccatcttcaag
accaacctggaagccgcgcaggcgatcgcgcgccaattgcgcctgcgcaacctgggcggc
atcgtgatcctggacttcatcgacatggaagacccggaccaccgcgaaaccgtgctggcc
gaactgaaaaaggcgctctcgcgcgaccgcacgcgcatgacggtcaacggcttcacccag
ctgggactggtcgagatgacgcgcaagcgtacccgcgactcgctcgcgcaccagctgtgc
gagccgtgcccgatgtgccaatcgcgcggcaatgtgcgcaccgcgcgcaccgtgtgctac
gagatcctgcgcgagatcctgcgcgaggcgcgccagttcaatccgcgcgagttccgcatc
ctggccgcgcagggcgtggtggacctgttcctggaagaggaaagccagcacctggcgatg
ctgggcgacttcgtcggcaagcagatctcgctggaagtcgagagccagtattcgcaagag
cagtacgacatcattctgatctag
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