Bordetella bronchiseptica RB50: BB3466
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Entry
BB3466 CDS
T00141
Symbol
ihfB
Name
(GenBank) integration host factor beta-subunit
KO
K05788
integration host factor subunit beta
Organism
bbr
Bordetella bronchiseptica RB50
Brite
KEGG Orthology (KO) [BR:
bbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbr03032
]
BB3466 (ihfB)
03036 Chromosome and associated proteins [BR:
bbr03036
]
BB3466 (ihfB)
03400 DNA repair and recombination proteins [BR:
bbr03400
]
BB3466 (ihfB)
DNA replication proteins [BR:
bbr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BB3466 (ihfB)
Chromosome and associated proteins [BR:
bbr03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BB3466 (ihfB)
DNA repair and recombination proteins [BR:
bbr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BB3466 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
CAE33958
UniProt:
A0A0H3LXY1
LinkDB
All DBs
Position
complement(3709424..3709756)
Genome browser
AA seq
110 aa
AA seq
DB search
MAARYPQLAARDTDYAVKTMLDAMTQALASGQRIEIRGFGSFSLSQRSPRIGRNPKSGEQ
VLVPGKQVPHFKAGKELRERVDLVGNDQGDDSSNGSSDPLQSVMDMHAMH
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
ttggcggcccgctatcctcagctggccgcccgcgacaccgattacgctgtcaagaccatg
ctcgatgcaatgacccaggccctggcctcgggtcagcgcatcgaaatccgcgggtttggc
agcttctcgctgtcgcagcgctccccccgtattgggcgcaatccgaagtcgggcgaacaa
gtgctggtacctggcaagcaggtgccgcacttcaaggccggcaaggagctgcgcgagcgg
gtcgatctggttggcaacgatcagggcgacgactcgtccaacgggtcgtccgacccgctg
caatcggtcatggatatgcatgccatgcactga
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integrated database retrieval system
