Bordetella bronchiseptica RB50: BB3842
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Entry
BB3842 CDS
T00141
Name
(GenBank) outer membrane porin protein precursor
KO
K03285
general bacterial porin, GBP family
Organism
bbr
Bordetella bronchiseptica RB50
Brite
KEGG Orthology (KO) [BR:
bbr00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
BB3842
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Gene cluster
GFIT
Motif
Pfam:
Porin_4
Porin_1
Motif
Other DBs
NCBI-ProteinID:
CAE35816
UniProt:
A0A0H3LZ68
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Position
complement(4072632..4073798)
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AA seq
388 aa
AA seq
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MKKTLLAAALLAGFAGAAQAETSVTLYGIIDTGIGYNDVDFKVKGANADGSDFKYNHSRF
GMINGVQNGSRWGLRGTEDLGDGLQAVFQLESGFNSGNGNSAQDGRLFGRQATIGLQSES
WGRLDFGRQTNIASKYFGSIDPFGAGFGQANIGMGMSAMNTVRYDNMVMYQTPSYSGFQF
GIGYSFSANDKDADAVNRVGFATADNVRAITTGLRYVNGPLNVALSYDQLNASNNQAQGE
VDATPRSYGLGGSYDFEVVKLALAYARTTDGWFGGQGYPVAVTLPSGDKFGGFGVNTFAD
GFKANSYMVGLSAPIGGASNVFGSWQMVDPSNDKLTGGDEKMNVFSLGYTYDLSKRTNLY
AYGSYAKNFAFLEDAKSTAVGVGIRHRF
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagactctgctcgctgccgccctgctcgccggtttcgccggtgccgctcaggca
gaaacgtcggtcaccctgtacggtatcatcgacacgggtatcggctacaacgatgtcgat
ttcaaggtgaaaggcgctaacgccgacggcagcgacttcaagtacaaccacagccgcttc
ggcatgatcaacggcgtgcagaacggttcgcgctggggtctgcgtggtacggaagatctg
ggtgacggcctgcaagctgtgttccaactggaatcgggcttcaactcgggcaacggtaac
tcggcccaagacggccgcctgttcggtcgccaagccaccatcggtctgcaaagcgaaagc
tggggccgtctggacttcggtcgccaaaccaacatcgcctcgaagtacttcggctcgatc
gatccgttcggcgctggcttcggtcaagccaacatcggcatgggcatgagcgcgatgaac
accgttcgctacgacaacatggtcatgtaccagaccccgtcgtacagcggcttccagttc
ggtatcggctactcgttcagcgcgaacgacaaggatgctgacgccgtcaaccgcgttggc
ttcgccaccgccgacaacgttcgtgccatcacgaccggtctgcgctacgtgaacggcccg
ctgaacgtcgctctgtcgtacgaccagctgaacgcctcgaacaaccaagcccaaggcgaa
gttgacgcgaccccgcgcagctacggcctcggcggttcgtatgacttcgaagtcgtgaag
ctggctctggcctacgctcgcacgaccgacggctggttcggtggccaaggctacccggtc
gccgtcacgctgccctcgggcgacaagttcggcggcttcggcgtgaacaccttcgctgac
ggcttcaaggccaactcgtacatggtcggcctgtcggcccccatcggcggcgccagcaac
gtgttcggttcgtggcagatggttgaccccagcaacgacaagctgaccggcggcgacgag
aagatgaacgtcttctcgctgggctacacctacgacctgtccaagcgcaccaacctgtac
gcctacggttcgtacgccaagaacttcgcgttcctggaagatgccaagtcgaccgctgtc
ggcgtcggtatccgtcaccgcttctaa
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