Bradyrhizobium brasilense CB627: QA636_00605
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Entry
QA636_00605 CDS
T09107
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bbra
Bradyrhizobium brasilense CB627
Brite
KEGG Orthology (KO) [BR:
bbra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbra03016
]
QA636_00605
Enzymes [BR:
bbra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
QA636_00605
Transfer RNA biogenesis [BR:
bbra03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
QA636_00605
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
RNase_T
Motif
Other DBs
NCBI-ProteinID:
WFU64117
LinkDB
All DBs
Position
complement(131484..132098)
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AA seq
204 aa
AA seq
DB search
MTIRLHRGDLPDLSRYTDSVAIDTETMGLHPHRDRLCVVQMSNGDGTADVIQIPKGHTDS
PNLKALLANPKITKIFHFARFDVAVLYNTFGVMPTPVYCTKIASRLSRTYTDRHGLKDLV
REVLNVELSKQQQSSDWGAQSLSEAQLAYAASDVLHLHALRDKLNVMLAREGRTDLAQAC
FDFLPARARLDLDGWEAEDIFAHS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccgcctgcatcgcggcgacctgcccgatctgtcccgctacaccgattcggtg
gcgatcgacaccgagaccatggggctgcatccgcaccgtgaccggctctgcgtggtgcag
atgtcgaacggcgacggcaccgccgacgtgatccagattccgaagggccacaccgattcg
ccgaacctgaaggcgctgctcgccaatcccaagatcaccaagatcttccatttcgcacgg
ttcgacgtcgcggtgctctacaacacgttcggcgtgatgccgacgccggtctattgcacc
aagatcgcctcgcggctgtcgcgcacctacaccgatcgccacggcctgaaggatctggtg
cgcgaggtgctgaacgtcgaattgtcgaagcagcagcagtcgagcgactggggcgcgcaa
agcctcagcgaggcccagctcgcctacgcggcctccgacgtgctgcacctgcatgcgctg
cgcgacaagttgaatgtcatgctcgcgcgcgagggacggaccgatctcgcccaggcctgc
ttcgatttccttcccgcccgtgccaggctcgatctcgacggctgggaggccgaggacatt
ttcgcccattcatga
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