Bradyrhizobium brasilense CB627: QA636_06270
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Entry
QA636_06270 CDS
T09107
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
bbra
Bradyrhizobium brasilense CB627
Brite
KEGG Orthology (KO) [BR:
bbra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bbra01002
]
QA636_06270
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bbra01011
]
QA636_06270
Peptidases and inhibitors [BR:
bbra01002
]
Cysteine peptidases
Family C82
QA636_06270
Peptidoglycan biosynthesis and degradation proteins [BR:
bbra01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
QA636_06270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
WFU65142
LinkDB
All DBs
Position
complement(1393291..1395588)
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AA seq
765 aa
AA seq
DB search
MRDCSNNRRGFDRVLMAVAATFLTVSATAAFAQDTPHSSASELAIDAAIPRPEPANVPPP
TASDFKADTTAALPDAAKPADVKPADVHATEAKPAETKPVDAKPAEPSATAKAVEPKPAD
AVTAPATKPADAPKTDTAVAPAAATPAPATATAPAASPAPATAAAPTTAPAPATAAAPAG
EPAKAASNVAAEDQPVADKLRELLASKSLRSFDRKNERAAAEKFYSAREYAPVFTKAGKL
TDAGKGVIARLKDAAADGLDASDYPVPDFAAATSPDALADAELKLAASMLDYARQAQSGR
MHWSQVSADILYPEHPIDPAEVFANVTSAKDASAALDGYNPPQKLYKELKQKLAELRGQG
DGPVITIADGPTLKYLPARKKQAAVEMDDPRVPDLRNKLGITEDADSTKYDATVARAVEK
FQSSVDLKPTGVLDERTVKALNNPKRDRQIDTVIVNMERWRWLPRQLGAASVGNAYVILN
IPDYTLKVMQNGAPVWTTRVVTGKPGQHATPLLTETMKYITVNPTWNVPPSIIYNEYLPA
LQQDPTVLQRMGLRLERNRDGSIHISQPPGEANALGRIRFNFPNKFLVYQHDTPDKYLFA
KDERAFSHGCMRVQNPDQYAAVLLNITEPNQHYTPERIRSMYGSSEVDLKFPTPIPVNIT
YQTAFVDDAGKLQLRRDVYGRDAAMLSLLRNGRGKDLETVVAHAQPSYSRPPSSSLPAGV
NVAGDNGFGSSGPNFFERLFGGFGQPEPQPIRRGQAQQQRRVITR
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgactgttcgaacaaccgtcgaggatttgaccgcgtattgatggccgtcgcggca
accttcctcacggtgtccgcgaccgcggccttcgcgcaggacacaccgcactccagcgcc
tcggaactcgcgatcgacgcggcgatcccgcgccccgaaccggccaacgtgccgcccccc
accgcaagcgatttcaaggccgacaccaccgccgcgctgcccgatgcagccaagccggcc
gacgtgaagccagcggatgtgcacgccaccgaagccaagcctgctgagacaaagccggtc
gacgccaagccggcagagccgagcgcgactgcaaaggccgtcgagccgaagcccgccgat
gccgtaaccgcgccggcgacgaagcccgccgacgcgccaaagaccgataccgccgtcgcg
ccggcggcggccacccccgcccctgcaacggccaccgcgcctgccgcaagccccgcgcct
gcaacggcagcggcgccgaccacagctcctgctcccgcgaccgccgcagcgccggcgggc
gaaccggcgaaggcggcaagcaacgttgctgccgaggatcagccggttgccgacaagctg
cgcgaactgctcgccagcaagtcgctgcgtagctttgaccgcaagaacgagcgcgcagcg
gccgagaaattctattcggctcgcgaatacgcgccggtgttcaccaaggccggcaagctg
accgacgccggcaagggcgtcatcgcccgcctgaaggacgcggccgccgacggcctcgat
gcatcagactatccggtgccggatttcgccgcggcgacctcgccggacgcgctggccgac
gccgagctgaagctcgccgccagcatgctggactacgcccgccaggcccagagcggccgc
atgcactggtcgcaggtgtcggcggacattctctatccggagcacccgatcgatccggcg
gaagtgttcgccaatgtgacctccgccaaggacgcctccgccgcgctcgacggctacaac
ccgccgcagaagctctacaaggagctgaagcagaagctcgccgagctgcgcggccagggc
gacggtccggtcatcacgatcgcggacggtccgacgctgaaatatttgccggcgcgcaag
aagcaggccgcggtcgagatggacgatccgcgcgtgccggacctgcgcaacaagctcggc
atcaccgaggatgccgacagcaccaagtatgacgcgacggtcgcgcgggcggtggagaaa
ttccagagcagcgtcgacctcaagccaaccggcgttctcgacgagcgcacggtcaaggcg
ctgaacaatccgaagcgcgaccgccagatcgacaccgtgatcgtcaacatggagcgctgg
cgctggctgccgcgccagctcggcgccgccagtgtcggcaatgcctatgtgatcctcaac
atcccggactacacgctgaaggtgatgcagaacggcgcgccggtctggaccacccgcgtc
gtcaccggaaagcccggccagcatgccacgccgcttctgaccgagacgatgaaatacatc
acggtcaatccgacctggaacgtgccgccgtcgatcatctacaacgaatatctgccggcc
ctgcagcaggatccgacggtgctgcagcgcatgggcctcaggctcgagcgcaaccgcgac
ggctcgatccacatttcgcagccgccgggtgaagccaacgcgctcggccgcatccgcttc
aacttcccgaacaagttcctggtctatcagcacgacacgccggacaagtacctgttcgcg
aaggacgagcgcgctttcagccacggctgcatgcgcgtgcagaatcccgatcagtacgcc
gccgtcctgctcaacattaccgagccgaaccagcactacacgccggagcggatccgcagc
atgtacggttcgagcgaggtcgacctgaaattcccgacgccgatcccggtaaacatcacc
taccagaccgcgttcgtggacgatgccggcaagctgcaattgcgcagggacgtttacggc
cgcgacgccgccatgctgtcgctgctcaggaacggccgcggcaaggatctcgagacggta
gtggcgcacgcccagccgagctactcgcgtccgccgagcagcagcctgcccgccggcgtc
aatgtcgccggcgacaacggctttggctcctccggaccaaacttcttcgagcgcctgttc
ggaggattcggacagccggagccgcagccgattcgtcgcgggcaggcccagcagcagcgc
cgggtgatcacccgctag
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