Bradyrhizobium brasilense CB627: QA636_09965
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Entry
QA636_09965 CDS
T09107
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
bbra
Bradyrhizobium brasilense CB627
Pathway
bbra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
QA636_09965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbra03400
]
QA636_09965
Enzymes [BR:
bbra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
QA636_09965
DNA repair and recombination proteins [BR:
bbra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
QA636_09965
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QA636_09965
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QA636_09965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
WFU65809
LinkDB
All DBs
Position
complement(2146759..2148111)
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AA seq
450 aa
AA seq
DB search
MHFAAIRTDWNLNEIDRFQVRSRLLPHVVPHPSALCTNGLPIARLLDKTLPAHYDMVRSI
RRTLLSWSPSIFVGYNSIRFDEEMLRHALFQTLHDAYLTSKHGNSRADALSLVMAATTLS
PTCLAVPRNAEGRPIYRLEGLAAANGIAHGDAHDAMGDVAATLELCRMVYDRSSELWQRF
VRFSKKATVAEFVESEEGFILTEFYANEAYHAPVVCIGKDPDQPNGRLCLRLDCGIDRLA
AMSEQELRAELSIKPSPIRRLRINAAPTLTPLFEASDLMLRGIALETIESTSRRIKEDQS
LRERLVAAFIAGRTERPRSLIVEEQLYDAFPGPNDEARMAAFHNVTWPEALSIALSFNDL
RLRAFGLRLIYFGSRSSLPRELRAEIERLLIDRLLSEAAGALTLGQAIEALDTIVVESRT
GTDALLADYRVHLNDRLTRVTQYQSQHLVA
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
gtgcacttcgccgcgatccgaaccgattggaatctgaacgagattgatcgtttccaggtc
cgatcccgtctgctgccgcatgttgtgccacacccttcggcgctgtgcaccaacggattg
ccgatagcgcgcctgttggacaaaacgctgccggcccactacgacatggtccggtccatc
aggcgaacgcttctttcctggtctccgtcgatcttcgtcggttacaactccatccgcttc
gacgaggagatgctacgccatgcgctgttccagacgctccacgacgcgtatctcactagc
aaacacggcaacagccgggcggatgcgctaagtctggtgatggcggccaccaccctttct
ccgacatgtctcgcggtcccacgcaacgcggaaggtcgccctatctatcgattagaaggc
ctcgcggcggcgaacggcattgcgcacggagacgcgcacgatgcgatgggggacgtggct
gcaacacttgaactgtgccggatggtctacgatcggtcttcggagctctggcaacgtttt
gtccgcttctcgaagaaggcgaccgtcgccgaatttgtggagtccgaggaaggcttcata
ctgacggagttctatgcgaacgaggcctaccacgctccagtagtttgcatcgggaaagat
ccggatcagccaaacggccgtctctgcctccggctggattgcggcatcgaccgtctcgcc
gcgatgtcagaacaggaactacgcgccgaactcagcatcaagccgagcccgatccgacgc
ttaaggatcaatgcggcgccgacgctaacgccgctctttgaggcctcggacttgatgctt
aggggaatagccttggaaacaattgagagcacctcccgcagaattaaggaagaccaatcg
ttgcgagaacggctcgtcgccgcattcattgcaggtcgaacagagcggccgcgatccctc
attgtagaggaacagctgtacgatgcatttcctgggccgaacgatgaggcgcgaatggcc
gccttccataacgtgacttggccggaagcactttcgattgccctgagcttcaatgacctg
cggctccgcgctttcggactgaggttgatctacttcggatcacgatccagtttgccacgc
gaacttcgagcggaaatcgagcgtcttctgatcgatcgtctattgagcgaggctgcgggc
gccctcactcttggtcaggcgatagaggcgctagacacaatcgtggtggaaagcaggacg
ggaacggatgctctgcttgctgactaccgcgtccatctgaacgatcgacttacgcgggtg
acacagtaccagtcccagcatctcgtggcctaa
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