Bradyrhizobium brasilense: QA636_28555
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Entry
QA636_28555 CDS
T09107
Name
(GenBank) VCBS domain-containing protein
Organism
bbra
Bradyrhizobium brasilense
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_4
Big_9
Motif
Other DBs
NCBI-ProteinID:
WFU68210
LinkDB
All DBs
Position
complement(6008978..6018175)
Genome browser
AA seq
3065 aa
AA seq
DB search
MANDLGGNSKSLFSVDNSISAGGISPTDLITQDTARAEATTGDTSLYGAKIWITSDGKVG
YDATTLSAAFKAQLDALQSGQVLTDTFTYAIRLGNGTLSWATATVQFAGANDAAVISGTT
IGTAVEAGGVNNAITGTPMVSGTLTDTDVDNTPNMFQVAAAGSATDNHYGTFQMTAGGTW
TYTLDNGNAAVQGLNVGGHLTDTFTVRTIDGTAQQITVTINGTNDAPVVTGAVTGSATED
GATSTLNALANASDVDDNTTLSVANVPAVLPAGVSYNAATHAFTLDPSDAAFQHLADGQT
TTVSVSYSVSDGTTSTPASVSWTVTGTNDAPVVTGAVTGSATEDGATSTLNALANASDVD
DNTTLSVANVPAVLPAGVSYNAATHAFTLDPSDAAFQHLADGQTTTVSVSYSVSDGTTST
PASVSWTVTGTNDAPVVTGAVTGSATEDGATSTLNALANASDVDDNTTLSVANVPAVLPA
GVSYNAATHAFTLDPSDAAFQHLADGQTTTVSVSYSVSDGTTSTPASVSWTVTGTNDAPV
VTGAVTGSATEDGATSTLNALANASDVDDNTTLSVANVPAVLPAGVSYNAATHAFTLDPS
DAAFQHLADGQTTTVSVSYSVSDGTTSTPASVSWTVTGTNDAPVVTGAVTGSATEDGATS
TLNALANASDVDDNTTLSVANVPAVLPAGVSYNAATHAFTLDPSDAAFQHLADGQTTTVS
VSYSVSDGTTSTPASVSWTVTGTNDAPVVTGAVTGSATEDGATSTLNALANASDVDDNTT
LSVANVPAVLPAGVSYNAATHAFTLDPSDAAFQHLADGQTTTVSVSYSVSDGTTSTPASV
SWTVTGTNDAPVVTGAVTGSATEDGATSTLNALANASDVDDNTTLSVANVPAVLPAGVSY
NAATHAFTLDPSDAAFQHLADGQTTTVSVSYSVSDGTTSTPASVSWTVTGTNDAPVVTGA
VTGSATEDGATSTLNALANASDVDDNTTLSVANVPAVLPAGVSYNAATHAFTLDPSDAAF
QHLADGQTTTVSVSYSVSDGTTSTPASVSWTVTGTNDAPVVTGAVTGSATEDGATSTLNA
LANASDVDDNTTLSVANVPAVLPAGVSYNAATHAFTLDPSDAAFQHLADGQTTTVSVSYS
VSDGTTSTPASVSWTVTGTNDAPVVTGAVTGSATEDGATSTLNALANASDVDDNTTLSVA
NVPAVLPAGVSYNAATHAFTLDPSDAAFQHLADGQTTTVSVSYSVSDGTTSTPASVSWTV
TGTNDAPVVTGAVTGSATEDGATSTLNALANASDVDDNTTLSVANVPAVLPAGVSYNAAT
HAFTLDPSDAAFQHLADGQTTTVSVSYSVSDGTTSTPASVSWTVTGTNDAPVVTGAVTGS
ATEDGATSTLNALANASDVDDNTTLSVANVPAVLPAGVSYNAATHAFTLDPSDAAFQHLA
DGQTTTVSVSYSVSDGTTSTPASVSWTVTGTNDAPVVTGAVTGSATEDGATSTLNALANA
SDVDDNTTLSVANVPAVLPAGVSYNAATHAFTLDPSDAAFQHLADGQTTTVSVSYSVSDG
TTSTPASVSWTVTGTNDAPVVTGAVTGSATEDGATSTLNALANASDVDDNTTLSVANVPA
VLPAGVSYNAATHAFTLDPSDAAFQHLADGQTTTVSVSYSVSDGTTSTPASVSWTVTGTN
DAPVVTGAVTGSATEDGATSTLNALANASDVDDNTTLSVANVPAVLPAGVSYNAATHAFT
LDPSDAAFQHLADGQTTTVSVSYSVSDGTTSTPASVSWTVTGTNDAPVVTGAVTGSATED
GATSTLNALANASDVDDNTTLSVANVPAVLPAGVSYNAATHAFTLDPSDAAFQHLADGQT
TTVSVSYSVSDGTTSTPASVSWTVTGTNDAPVVTGAVTGSATEDGATSTLNALANASDVD
DNTTLSVANVPAVLPAGVSYNAATHAFTLDPSDAAFQHLADGQTTTVSVSYSVSDGTTST
PASVSWTVTGTNDAPVVTGAVTGSATEDGATSTLNALANASDVDDNTTLSVANVPAVLPA
GVSYNAATHAFTLDPSDAAFQHLADGQTTTVSVSYSVSDGTTSTPASVSWTVTGTNDAPV
VTGAVTGSATEDGATSTLNALANASDVDDNTTLSVANVPAVLPAGVSYNAATHAFTLDPS
DAAFQHLADGQTTTVSVSYSVSDGTTSTPASVSWTVTGTNDAPVLSDTADPVAVTELANA
SAQNLAAITGSFSVLDKDVGDTLTASVAGNPTVLLNGSPFTLPAGAAALTAAGAFTVTGA
TSNGGTVSIGYNYDPAAANLDFLKAGQSLTITYAVKVNDGSTDSGTQDVTFTINGTNDAP
VITAGNTLNFTAGSAATAVSPAAIITDIDSTDFNGGTLTIHFSAGGTSADQLTIHNQGNN
AGQIGISGNTVTYGGATIGTFAGGTNGTDLVVSFTSANATPAAAQALLDDIFYSNSTSGA
TTKTIQYTLVDGDGTASGGTDTGSATATISVTAASSPMSATYSWGTGSQSKNLSVSGTVS
GSVSGDKVVVSWGDNSSDTTVTLGANGSFQTSHAYSNSSSFTVTLKAEHSNNTVFATLSE
TSGGGSGSFAPAGIAGEPINLGLINPTTDHGSVTVTIKDVPEGWVINGATQNLDGSWTTT
TNDVSALTITSPVNSTGAEVLHVSMSWTSADGSTGTFEAIDNVEAYSQGSPIFAWSGDDH
LTGSSGHDTFVFSQPIGNDVVHNFEVSSDVIDLISYGWQSFAVVQAHTADDAGGNAVITL
ADGQKVTLDGVHAADLTSANFEFDVTPTVENPGQMTIGDGAMLPLSGSIHNTGTIELQAL
GDDTLLQLIQTGVTLNGGGHVILSNDDHNIIAGTATSVTLDNVDNVISGAGQIGQGSLTL
SNEGTIDASGTHALVIDTGANVIANAGTLEATGTGGLVLTSAVANSGLIWANGGNVTAEG
EVTGSGGALISGAGTIEFGAASAAGVTFDVTAAGHLILDDAFHFSGTVSGLDGNDDIDIK
GISFGAGTTLSYTENQAGTGGTLTVSDGAHTANIVLLGQYDPNGFAEKADATNGTIITYD
PHHVA
NT seq
9198 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgatctgggcggcaattctaagagccttttctcggttgataatagcatcagt
gcgggtggcattagtccgaccgatttgatcacccaagataccgcccgtgctgaggcgacc
accggtgataccagcctctacggcgcgaagatctggattacttcagacggcaaggtcggt
tatgacgcaacaactttgagcgcagctttcaaagcacaactcgacgcgctgcaatcaggt
caagtcctcaccgatacgttcacttatgcaattcggcttggcaatggaacgcttagctgg
gctactgccaccgtgcagttcgcgggggcaaacgatgcggcggtaatttcaggcacgaca
attggcaccgcggtggaggccggcggcgtcaacaacgcaatcaccggcactccgatggtc
agcggcacgctgaccgataccgacgtcgacaacacgccaaatatgttccaggtggcggcg
gccggctcggccacggataaccactacggcaccttccagatgaccgccggtggcacctgg
acctacacgctcgacaacggcaatgccgcggttcagggactgaatgtcggcggtcacctg
accgacacgtttacggtccgcaccatcgacggcacggcgcagcagatcactgtcaccatc
aatggcaccaacgacgccccggtggtcaccggcgcggtgaccggctcggcgaccgaggac
ggcgccaccagcacgctcaacgcgctggccaacgcctccgatgtcgatgacaacaccacg
ctgtcggtggccaacgtcccggcggtgctgccggccggcgtcagctataacgcagcgacg
cacgccttcacgctcgatccgagcgatgccgcgttccagcatcttgccgacggccagacc
acgacggtgtcggtgagctatagcgtctccgacggcaccacctcgaccccggcctcggtg
tcgtggaccgtcaccggcaccaacgacgccccggtggtcaccggcgcggtgactggctcg
gcgaccgaggacggcgccaccagcacgctcaacgcgctggccaacgcctccgatgtcgat
gacaacaccacgctgtcggtggccaacgtcccggcggtgctgccggccggcgtcagctat
aacgcggcgacgcacgccttcacgctcgatccgagcgatgccgcgttccagcatcttgcc
gacggccagaccaccacggtgtcggtgagctatagcgtctccgacggcaccacctcgacc
ccggcctcggtgtcgtggaccgtcaccggcaccaacgacgccccggtggtcaccggcgcg
gtgactggctcggcgaccgaggacggcgccaccagcacgctcaacgcgctggccaacgcc
tccgatgtcgatgacaacaccacgctgtcggtggccaacgtcccggcggtgctgccggct
ggcgtcagctataacgcggcgacgcacgccttcacgctcgatccgagcgatgccgcgttc
cagcatcttgccgacggccagaccacgacggtgtcggtgagctatagcgtctccgacggc
accacctcgaccccggcctcggtgtcgtggaccgtcaccggcaccaacgacgccccggtg
gtcaccggcgcggtgaccggctcggcgaccgaggacggcgccaccagcacgctcaacgcg
ctggccaacgcctccgatgtcgatgacaacaccacgctgtcggtggccaacgtcccggcg
gtgctgccggctggcgtcagctataacgcggcgacgcacgccttcacgctcgatccgagc
gatgccgcgttccagcatcttgccgacggccagaccaccacggtgtcggtgagctatagc
gtctccgacggcaccacctcgaccccggcctcggtgtcgtggaccgtcaccggcaccaac
gacgccccggtggtcaccggcgcggtgactggctcggcgaccgaggacggcgccaccagc
acgctcaacgcgctggccaacgcctccgatgtcgatgacaacaccacgctgtcggtggcc
aacgtcccggcggtgctgccggccggcgtcagctataacgcggcgacgcacgccttcacg
ctcgatccgagcgatgccgcgttccagcatcttgccgacggccagaccaccacggtgtcg
gtgagctatagcgtctccgacggcaccacctcgaccccggcctcggtgtcgtggaccgtc
accggcaccaacgacgccccggtggtcaccggcgcggtgaccggctcggcgaccgaggac
ggcgccaccagcacgctcaacgcgctggccaacgcctccgatgtcgatgacaacaccacg
ctgtcggtggccaacgtcccggcggtgctgccggccggcgtcagctataacgcggcgacg
cacgccttcacgctcgatccgagcgatgccgcgttccagcatcttgccgacggccagacc
accacggtgtcggtgagctatagcgtctccgacggcaccacctcgaccccggcctcggtg
tcgtggaccgtcaccggcaccaacgacgccccggtggtcaccggcgcggtgaccggctcg
gcgaccgaggacggcgccaccagcacgctcaacgcgctggccaacgcctccgatgtcgat
gacaacaccacgctgtcggtggccaacgtcccggcggtgctgccggccggcgtcagctat
aacgcagcgacgcacgccttcacgctcgatccgagcgatgccgcgttccagcatcttgcc
gacggccagaccaccacggtgtcggtgagctatagcgtctccgacggcaccacctcgacc
ccggcctcggtgtcgtggaccgtcaccggcaccaacgacgccccggtggtcaccggcgcg
gtgactggctcggcgaccgaggacggcgccaccagcacgctcaacgcgctggccaacgcc
tccgatgtcgatgacaacaccacgctgtcggtggccaacgtcccggcggtgctgccggct
ggcgtcagctataacgcggcgacgcacgccttcacgctcgatccgagcgatgccgcgttc
cagcatcttgccgacggccagaccacgacggtgtcggtgagctatagcgtctccgacggc
accacctcgaccccggcctcggtgtcgtggaccgtcaccggcaccaacgacgccccggtg
gtcaccggcgcggtgaccggctcggcgaccgaggacggcgccaccagcacgctcaacgcg
ctggccaacgcctccgatgtcgatgacaacaccacgctgtcggtggccaacgtcccggcg
gtgctgccggctggcgtcagctataacgcggcgacgcacgccttcacgctcgatccgagc
gatgccgcgttccagcatcttgccgacggccagaccaccacggtgtcggtgagctatagc
gtctccgacggcaccacctcgaccccggcctcggtgtcgtggaccgtcaccggcaccaac
gacgccccggtggtcaccggcgcggtgactggctcggcgaccgaggacggcgccaccagc
acgctcaacgcgctggccaacgcctccgatgtcgatgacaacaccacgctgtcggtggcc
aacgtcccggcggtgctgccggccggcgtcagctataacgcggcgacgcacgccttcacg
ctcgatccgagcgatgccgcgttccagcatcttgccgacggccagaccaccacggtgtcg
gtgagctatagcgtctccgacggcaccacctcgaccccggcctcggtgtcgtggaccgtc
accggcaccaacgacgccccggtggtcaccggcgcggtgaccggctcggcgaccgaggac
ggcgccaccagcacgctcaacgcgctggccaacgcctccgatgtcgatgacaacaccacg
ctgtcggtggccaacgtcccggcggtgctgccggccggcgtcagctataacgcggcgacg
cacgccttcacgctcgatccgagcgatgccgcgttccagcatcttgccgacggccagacc
accacggtgtcggtgagctatagcgtctccgacggcaccacctcgaccccggcctcggtg
tcgtggaccgtcaccggcaccaacgacgccccggtggtcaccggcgcggtgaccggctcg
gcgaccgaggacggcgccaccagcacgctcaacgcgctggccaacgcctccgatgtcgat
gacaacaccacgctgtcggtggccaacgtcccggcggtgctgccggccggcgtcagctat
aacgcagcgacgcacgccttcacgctcgatccgagcgatgccgcgttccagcatcttgcc
gacggccagaccaccacggtgtcggtgagctatagcgtctccgacggcaccacctcgacc
ccggcctcggtgtcgtggaccgtcaccggcaccaacgacgccccggtggtcaccggcgcg
gtgaccggctcggcgaccgaggacggcgccaccagcacgctcaacgcgctggccaacgcc
tccgatgtcgatgacaacaccacgctgtcggtggccaacgtcccggcggtgctgccggcc
ggcgtcagctataacgcagcgacgcacgccttcacgctcgatccgagcgatgccgcgttc
cagcatcttgccgacggccagaccaccacggtgtcggtgagctatagcgtctccgacggc
accacctcgaccccggcctcggtgtcgtggaccgtcaccggcaccaacgacgccccggtg
gtcaccggcgcggtgactggctcggcgaccgaggacggcgccaccagcacgctcaacgcg
ctggccaacgcctccgatgtcgatgacaacaccacgctgtcggtggccaacgtcccggcg
gtgctgccggccggcgtcagctataacgcggcgacgcacgccttcacgctcgatccgagc
gatgccgcgttccagcatcttgccgacggccagaccaccacggtgtcggtgagctatagc
gtctccgacggcaccacctcgaccccggcctcggtgtcgtggaccgtcaccggcaccaac
gacgccccggtggtcaccggcgcggtgactggctcggcgaccgaggacggcgccaccagc
acgctcaacgcgctggccaacgcctccgatgtcgatgacaacaccacgctgtcggtggcc
aacgtcccggcggtgctgccggctggcgtcagctataacgcggcgacgcacgccttcacg
ctcgatccgagcgatgccgcgttccagcatcttgccgacggccagaccaccacggtgtcg
gtgagctatagcgtctccgacggcaccacctcgaccccggcctcggtgtcgtggaccgtc
accggcaccaacgacgccccggtggtcaccggcgcggtgactggctcggcgaccgaggac
ggcgccaccagcacgctcaacgcgctggccaacgcctccgatgtcgatgacaacaccacg
ctgtcggtggccaacgtcccggcggtgctgccggccggcgtcagctataacgcggcgacg
cacgccttcacgctcgatccgagcgatgccgcgttccagcatcttgccgacggccagacc
accacggtgtcggtgagctatagcgtctccgacggcaccacctcgaccccggcctcggtg
tcgtggaccgtcaccggcaccaacgacgccccggtggtcaccggcgcggtgaccggctcg
gcgaccgaggacggcgccaccagcacgctcaacgcgctggccaacgcctccgatgtcgat
gacaacaccacgctgtcggtggccaacgtcccggcggtgctgccggccggcgtcagctat
aacgcggcgacgcacgccttcacgctcgatccgagcgatgccgcgttccagcatcttgcc
gacggccagaccaccacggtgtcggtgagctatagcgtctccgacggcaccacctcgacc
ccggcctcggtgtcgtggaccgtcaccggcaccaacgacgccccggtggtcaccggcgcg
gtgaccggctcggcgaccgaggacggcgccaccagcacgctcaacgcgctggccaacgcc
tccgatgtcgatgacaacaccacgctgtcggtggccaacgtcccggcggtgctgccggcc
ggcgtcagctataacgcggcgacgcacgccttcacgctcgatccgagcgatgccgcgttc
cagcatcttgccgacggccagaccacgacggtgtcggtgagctatagcgtctccgacggc
accacctcgaccccggcctcggtgtcgtggaccgtcaccggcaccaacgacgccccggtg
gtcaccggcgcggtgaccggctcggcgaccgaggacggcgccaccagcacgctcaacgcg
ctggccaacgcctccgatgtcgatgacaacaccacgctgtcggtggccaacgtcccggcg
gtgctgccggctggcgtcagctataacgcggcgacgcacgccttcacgctcgatccgagc
gatgccgcgttccagcatcttgccgacggccagaccaccacggtgtcggtgagctatagc
gtctccgacggcaccacctcgaccccggcctcggtgtcgtggaccgtcaccggcaccaac
gacgccccggtgctgagcgacacggcggatccagttgcggtaacggagcttgcgaatgcg
tcggcgcagaatctcgcggcgatcaccggtagcttctccgttctcgacaaggatgtcggc
gacacgctgaccgcgagcgtggctggcaatccgacggtcctgctgaacggctcaccattc
acgctgccggcgggcgctgcggcactgaccgcggcaggcgccttcacggtcaccggggcg
acgtcgaacggcggcaccgtttctattggctacaactacgatcccgcagcggccaacctc
gacttcctgaaggctggccagagcctgaccatcacctatgcggtgaaagtcaacgacggt
tcgacggattcgggcacgcaggatgtcacctttaccatcaacggtaccaacgatgcgccg
gtgatcacggcgggaaacacgctcaacttcacagcaggaagcgcagcgaccgctgtttct
cccgctgccattatcactgacatcgactcgacggatttcaacggcggcacgctgacgatt
cactttagcgcaggtggcacatcagccgatcaactaacgattcacaaccagggaaacaac
gcgggccagatcggaatcagcggcaacacggtaacttacggcggtgctaccatcggtacc
ttcgcggggggaaccaatggcaccgatctcgtcgtgtcattcacgagtgcgaacgcaacg
ccagcggcggcgcaagcgctgctcgacgacattttctattccaactcgaccagcggggcg
acgactaagacgatccagtacacgcttgttgatggagacggtactgctagcggcggtacc
gataccggttcggcaaccgcgacgataagcgtaacagcagctagctcgccaatgagtgct
acttactcttggggaactggtagtcagagcaaaaacctctcggtttcaggtacggtgagc
ggcagcgtatccggggacaaggtggtggtttcgtggggcgacaatagctcggataccacc
gtgacattgggggcaaatgggtcgttccaaacgagccatgcttattcaaacagctcgtcg
tttaccgtcaccttaaaggcggagcattcaaacaatacggtattcgcgactttgtcggaa
acctctggcggcgggtcaggaagcttcgctccggcgggcattgcaggagagccgataaac
ctgggtctgataaatccgacaacggatcacggatctgtaaccgtgacgatcaaggacgtt
cccgaaggctgggtaattaatggcgcgactcaaaatctcgacggatcgtggactacgacc
accaacgatgtttccgcactcacgatcacatcacccgtgaattcgacgggagcggaggtg
ctacatgtgtcgatgagctggacctccgcggacgggtccaccggaacgttcgaagctatc
gataacgttgaggcttattcgcaaggctcgcctatctttgcctggtccggcgacgaccac
ctgaccggctcgagcggccacgacaccttcgtattctcgcagccgatcggcaacgatgtc
gtgcacaacttcgaggtgtcctccgatgtgatcgatttgatcagctacggctggcagagc
ttcgcggtcgtccaggcccataccgcggacgacgctggcggcaatgctgtgatcacgctg
gccgatggccagaaagttaccctggacggtgtgcatgcggcggacctgacttcagcgaat
ttcgagttcgacgtgacgcccaccgtcgaaaatccaggccagatgaccattggcgatggt
gcaatgctgccgttgtccggcagtatccataacacgggcacgatcgagttgcaggcgtta
ggcgacgacacgctgctgcagctgatccagaccggggtcacgctcaacggcggcggccac
gtaattctgtccaacgatgatcacaacatcatcgccggcacggccacgagcgtcacactc
gataacgtcgacaacgtgatctcgggagccggccagatcgggcagggtagcctgaccttg
agcaacgagggcaccatcgatgccagtggaacccacgccctggtgatcgacaccggcgcc
aacgtgatcgccaacgccggcacgctagaggcaaccggtacgggtgggctggtgctcacc
agtgcggtggccaacagcggtctgatctgggccaatggcggtaacgtcacagctgagggc
gaggttaccggcagcggcggcgctctgatcagcggggccggcaccatcgagttcggggca
gcctcggcggcaggcgttaccttcgatgtgactgccgccggccacctgatcctggatgac
gccttccacttctccggaacggtgagcggcctcgatggcaatgacgacatcgacatcaag
ggcatcagcttcggcgcaggcaccacgttgagctacacggagaaccaggcggggaccggc
ggcactctgacggtgtcggatggcgctcacacggcgaacatcgtcctgctcggtcaatac
gatccgaacgggtttgccgagaaggccgacgcaacgaacggcacgatcattacttacgat
ccgcaccacgtagcctga
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