Bradyrhizobium brasilense CB627: QA636_32160
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Entry
QA636_32160 CDS
T09107
Name
(GenBank) helicase-related protein
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bbra
Bradyrhizobium brasilense CB627
Pathway
bbra03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QA636_32160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbra03400
]
QA636_32160
Enzymes [BR:
bbra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QA636_32160
DNA repair and recombination proteins [BR:
bbra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
QA636_32160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
TRCF
UvrB_inter
ResIII
CarD_TRCF_RID
SecA_DEAD
Cas3-like_C_2
AAA_30
RecG_dom3_C
AAA_25
UB2H
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WFU68244
LinkDB
All DBs
Position
complement(6849186..6852290)
Genome browser
AA seq
1034 aa
AA seq
DB search
MLALHLLEQWKKSGRDGIVFLAESENRAERLGSVLHSLDPSLEVLVFPRLNTLPFDGLEP
SREIAGRRSSVLRRLARSKKPVFLVSTAEAIMERLPLPASSARLSISLKVGAGYSEQELK
DRLEALGYDLDEEADYPGSALFHGMTFEVFPAGALGPFRIEHSGGVIRRIAGVDPDEHDV
VFDAEELHIDPMSERIALGGKRAQRAALPDYCQRARWIADAGVSGHADSWLSTIKEAAGR
REAEREYLGPADWKRLTKRMSSLPRKAAFTATPDFSKVASSRKALRAFVADTERAGSRLL
FVAAVEDDLRAMERMSGIKAERFADWNEAAKGRGGEGALLADFDTGFIGSGRKPLVVVTA
TDVLGSRAHHPQPMARAWSSAFDHPDVPERGAVVVHLQRGLAVLDGLQTFDMGKGSSREM
IRLAFAGDDAVLVPPADLALIWPYAAELGKLALDRADGSTWWTRRGKAEREIQTAAKALA
KHIAQRRRRRAPKLVAPGPAYERFVARFPYFTTVDQAKAIRDVLDDLASGHPMDRVVCGD
VGFGKTEVALRAAAAVALSGKQVAVVVPTTVLARQHVATFRKRFAPLGIEVGSLSRATSA
PEVKETKEGLRSGKMKVVVGTQAIASKDVRFAKLSLVIVDEEQHFGAAEKAKLSGLAKGA
HTLWMSATPIPRTLAAGLAGFRELSVIASPPVHRLPVATKIAPLSDAAIAAALLREQRRH
GQSFLICPRIQDLDPMLARVQSMAPELRIVCLHGKLPVDEIDDRMMSFVEGEADVLLATN
IVESGLDIPRANTIVVCWPEKFGLAQLHQLRGRVGRGGTRAFAYMLTESSSEQSGRRLAV
LEEFSRPGAGFAISERDLDLRGAGDLLSERQSGHVQVFGPVLYSHLLKQASEKTNDRSAD
MWVPDLNLPLADLLPRSYVQSESVRLEIYGRAARCRSEDDLEDLEEETSRRFGRLPSAGR
DFFAAARLRIDCKRRGIVRLDVGPEAVAATFLPGRLPKSRARSLQRDGDRVFYSDNIHEP
PFERIEDLLDILDE
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgcttcatcttctcgagcaatggaagaaatccgggcgggacggcatcgttttc
cttgcggaaagcgagaacagggcagagcgcctgggcagcgtgctgcattcgctcgatccc
tcgctcgaggtgctggtgttcccgaggctgaataccttgccctttgacgggctggagccg
tcacgagagatcgccggccggcgcagttcggtgttgaggcgcctcgcccggagcaagaag
ccggtcttcctggtgtcgacggccgaggcgatcatggagcggttgccgttgcccgccagc
tcggcgcgcctcagcatcagcctgaaggtgggggcgggctattccgagcaggaactcaag
gatcgtctggaagctctgggatacgatctcgacgaagaggcggattatcccggcagcgct
ctgttccacggaatgacgttcgaggtatttcccgcgggcgcgctggggccgttcagaatt
gagcattccggtggcgtgatccgcagaatcgccggtgtcgatccagacgagcacgacgtc
gtgttcgacgcggaggaactgcacatcgacccgatgtccgaacggatcgcgttgggaggc
aagcgggcacagcgggcggcgctgccggattattgtcagcgcgcgcgctggatcgcggac
gccggcgtttcgggccacgccgatagctggctgagcacgatcaaggaggcggccggccgc
agggaggcggagcgcgagtatctggggcccgctgactggaaacggctgaccaaacggatg
agctcgctgccccgaaaggcagctttcaccgccacgcctgatttctcgaaggtcgcctca
tcgcggaaggctcttcgcgcatttgtcgccgacaccgagcgcgccggatcgcggctgctg
tttgtcgcggcggtcgaagatgacctgcgcgcgatggagcgaatgagcgggatcaaggcg
gagcgcttcgccgactggaacgaggcggcgaaggggcggggcggcgaaggcgcgctgctg
gccgacttcgacaccggcttcatcggctcagggcgcaagccgctcgtcgtcgtgacggcg
accgacgtgctcggcagcagggcgcatcatccgcagcccatggcgcgagcctggagctcg
gctttcgatcatcccgacgtgccggagcgcggcgcggtcgtcgtgcatctgcaacgcggg
ctggccgtgctcgatggcttgcagaccttcgatatggggaagggatcatcgcgcgagatg
atcaggctggcattcgcgggggatgatgccgtcctcgttccgccggccgatcttgcgctg
atctggccgtatgccgcggagctcggcaagctggcattggacagggccgatggcagtacg
tggtggacgcggcgtggcaaggcggagcgggaaatccagactgccgccaaggcgcttgcc
aaacacatcgcgcaacggcgccgccggcgcgctcccaagctggtcgctcccggtcccgcc
tatgagcggttcgtcgcgcgctttccgtatttcacgaccgtcgaccaggcgaaggcaatt
cgcgacgtcctcgatgatctggcgtccggtcatccgatggatcgggtcgtctgcggcgac
gtcgggtttggcaagaccgaggtggcattgcgcgcggcggcggccgttgcgctgtcgggc
aagcaggtcgccgtcgtcgtgccgacgactgttctggcaaggcagcacgttgcaaccttc
cgcaaacggtttgctccgcttggcatcgaagtgggaagcctgtcgcgggcgacgtcggct
ccggaggtgaaggagaccaaggagggcctgcgaagcggcaagatgaaggtcgtggtcggc
acgcaggcgatcgcatcgaaggacgtgaggttcgccaagctgagcctggtcattgtcgac
gaagagcagcacttcggcgcggccgagaaggcgaagctttcagggctggcgaagggcgcc
catacgctgtggatgagtgccacgccgattccgcgcacacttgcggcgggccttgcggga
ttcagggagctgagcgtgatcgcatccccgcccgttcatcggcttccggtcgcgaccaag
atcgctccgctctcggacgccgccatcgccgcagcattgctgcgcgagcagcgacgtcac
gggcaaagctttctgatctgtccgcgcatccaggatctggatccgatgctggcgcgcgtg
cagtcgatggccccggagctccgcatcgtctgcctgcatggcaagctacccgtcgacgaa
atcgacgatcgaatgatgagcttcgtcgaaggcgaggcggacgtcctcctggcgaccaac
atcgtggaaagcggtctcgacatcccccgggcgaacaccatcgtggtctgctggccggaa
aagttcggtctggcacagctccaccagctcagaggccgggtgggacgcggcgggacacga
gccttcgcatacatgctgaccgaatccagttcggaacaatccgggaggcgtttggccgtt
ctggaggagttcagcagaccgggcgccggttttgcgatcagcgagcgggatctcgacctc
agaggcgccggggatctgctttcggagcggcaatccggccacgtgcaggttttcggtccg
gtgctctacagccaccttctgaagcaagcctcggagaagaccaacgaccggtccgccgat
atgtgggtgcccgatctcaaccttccgctcgcggatctgctgcccaggagctatgtgcaa
tcggaatccgtgcggcttgaaatctatggccgtgccgcgaggtgccggagcgaagacgat
ctggaggatctcgaggaagagacctcgcgccgcttcggcaggctgccgtcggcggggcgg
gacttcttcgccgcggcgaggctcaggatcgattgcaagcggcgagggatcgtgaggctc
gatgtcggcccggaggccgtcgcggcgacgttccttcccgggaggctgcccaaatccaga
gcacgttcgctccagcgcgacggcgatcgcgtgttctattcggacaacatacacgagccg
cctttcgagcggatcgaggatctcctggacattttggacgagtga
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integrated database retrieval system
