Bradyrhizobium brasilense CB627: QA636_36620
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Entry
QA636_36620 CDS
T09107
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bbra
Bradyrhizobium brasilense CB627
Pathway
bbra02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bbra00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QA636_36620 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbra03021
]
QA636_36620 (rpoD)
Transcription machinery [BR:
bbra03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QA636_36620 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
WFU62893
UniProt:
A0A1R1QY26
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All DBs
Position
complement(7888936..7891068)
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AA seq
710 aa
AA seq
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MATKAKTLQVKDKEKDDKAADAPEKDAADAPSPLLDLSDAAVKKMIKQAKKRGFVTFDQL
NEVLPSDTTSPEQIEDIMSMLSDMGINVTEADDSEGEDEKDDGDDETDNELVEVTQKAVT
EVKKSEPGERTDDPVRMYLREMGTVELLSREGEIAIAKRIEAGREAMIAGLCESPLTFQA
IIIWRDELNEGKIFLRDIIDLEATYAGPESKGGINPNLIGNNGAEGAAAEGNGGDAQAGA
PAHVAPPAAPPSPTPFRAAPAGGEAATEEKDPAEAAAEGDMDDDEFENQMSLAAIEAELK
PKVVETFDKIASEYKKLRRLQEQDIANQLQSESLSPSQERKYKKLKDEIIVEVKSLRLNQ
ARIDSLVEQLYDINKKLVSFEGRLLRLGDSHGVAREDFLRNYQGSELDPRWLNRVSKLSA
KGWKNFVHHEKDRIKDLRHEIQSLAALTGLEIGEFRKIVHGVQKGEREARQAKKEMVEAN
LRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSI
ADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLKIAKE
PLSLETPVGDEEDSHLGDFIEDKNAILPIDAAIQSNLRETTTRVLASLTPREERVLRMRF
GIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDN
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaaggcaaagacgctgcaggttaaggacaaggaaaaagacgacaaggcagcg
gatgctcctgagaaggatgccgctgacgcgccgtcgccgttgctcgacctgtcggatgcc
gcggtgaagaagatgatcaagcaggccaagaagcgcggcttcgtgaccttcgatcagctc
aacgaagtgctgccctccgatacgacgtcgcccgaacagatcgaagacatcatgtcgatg
ctgtcagacatgggcatcaacgtcaccgaggccgacgacagcgaaggcgaggacgagaag
gacgacggcgacgacgagaccgataacgagctcgtcgaggtcacgcagaaggccgtcacc
gaggtcaagaagtcggagcccggcgagcgcaccgacgatcccgtgcgcatgtatctgcgc
gagatgggcaccgtcgagctgctctcccgcgaaggcgaaatcgcgattgcaaaacgcatc
gaggccggccgcgaggcgatgatcgcgggcctctgcgaaagcccgctgaccttccaggcc
atcatcatctggcgcgacgagctcaacgaaggaaagatcttcctccgcgacatcatcgat
ctcgaagccacctatgccggccccgagtccaagggcggcatcaatccgaacctgatcggc
aacaacggcgccgagggtgccgccgctgagggcaatggcggcgacgcgcaggccggtgcg
ccggcccatgtcgcgccgccggcagcgccgccgtcgccgaccccgttccgcgccgcgccc
gccggtggcgaagccgccaccgaggagaaggatcccgccgaggccgccgccgaaggcgac
atggacgacgacgagttcgagaaccagatgtcgctcgccgccatcgaggccgagctgaag
ccgaaggtggtcgagaccttcgacaagatcgcatccgagtacaagaagctgcgccgcctg
caggagcaggacatcgccaaccagctgcagagcgagtcgctgtcgccctcgcaggagcgc
aagtacaagaagctgaaggacgagatcatcgtcgaggtgaagtcgctgcgcctcaaccag
gcccgcatcgattcgctggtcgagcagctctacgacatcaacaagaagctggtctcgttc
gagggccgcctgctgcgcctcggcgacagccacggcgtcgcgcgcgaggacttcctgcgc
aactaccagggctccgagctcgatccgcgctggctcaaccgcgtctccaagctgtcggcc
aagggctggaagaacttcgtccatcacgagaaggaccgcatcaaggacctgcgtcacgag
atccagtcgcttgcggcgctcaccgggctcgagatcggcgaattccggaagatcgtgcac
ggcgtgcagaagggcgagcgcgaggcccgtcaggccaagaaggagatggtggaagccaac
ctccgtctcgtgatctcgatcgccaagaagtacaccaaccgcggcctgcagttcctcgac
ctgatccaggaaggcaatatcggcctgatgaaggcggtcgataagttcgaatatcgccgc
ggctacaagttctcaacctacgccacctggtggatccggcaggcgatcacccgttcgatc
gccgaccaggcccgcaccatccgcatccccgtgcacatgatcgagacgatcaacaagatc
gtccgcacctcgcgccagatgctgaacgagatcggccgcgagccgaccccggaagagctc
gccgagaagctcggcatgccgctcgagaaggtgcgcaaggtcctcaagatcgccaaggag
ccgctgtcgctcgaaacgcctgtgggcgatgaagaggattcgcatctcggcgatttcatc
gaggacaagaacgcgatcctgccgatcgacgctgcgatccagtccaacctgcgcgagacc
acgacgcgcgtgctggcctcgctcaccccgcgcgaggagcgcgtgctgcgcatgcgcttc
ggcatcggcatgaacaccgaccacacgctggaagaagtcggccagcagttctcggtcacc
cgcgagcgcatccgccagatcgaggccaaggcgctgcgcaagctgaagcacccgtcgcgg
tcgcggaagctgcggagcttcctggacaactaa
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