Bifidobacterium breve JCM 7019: B7019_0173
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Entry
B7019_0173 CDS
T03121
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bbrc
Bifidobacterium breve JCM 7019
Pathway
bbrc03030
DNA replication
bbrc03430
Mismatch repair
bbrc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B7019_0173
03430 Mismatch repair
B7019_0173
03440 Homologous recombination
B7019_0173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbrc03032
]
B7019_0173
03400 DNA repair and recombination proteins [BR:
bbrc03400
]
B7019_0173
Enzymes [BR:
bbrc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B7019_0173
DNA replication proteins [BR:
bbrc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B7019_0173
DNA repair and recombination proteins [BR:
bbrc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B7019_0173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_5
AAA_16
NolB
DNApol3-delta_C
AAA_22
AAA_18
KTI12
Motif
Other DBs
NCBI-ProteinID:
AHJ18507
LinkDB
All DBs
Position
224732..225883
Genome browser
AA seq
383 aa
AA seq
DB search
MSVWDSLVGQQPVIHMLSRIAQGDPSQIAQSWLICGPPGSGRSNMARAFAAALESPDHGM
SDEPTRVTQQVLAGTHPDVTVLATNKVTIGIDQVREIITTSEQMPATAPWRIIVIEDVDR
MLERTTNVLLKEIEEPAEHCIWLLCAPSAQDVLPTIRSRTRIVNLAVPSASAVAGFLTAT
TGVEPKVAQRAARLAEGHIGIAKLYATDEQVMTDRDELVVGVLNLARASDAVLLAGNLID
NAKAQAEVDASRTAADQEAEFRRINGLEPGERIPPKLRGAFNQIAKKDDLKRLTTRRTRD
VLDRALNSIASIYRDVAVLQNNAEDSVGLINLENRSAITELSVRLNRAGAVARLDEVAHA
RKRLAGNGNPLLVFESLFCALIP
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtatgggattcgttggtaggccagcagccggtaatccacatgctcagccgcatc
gcgcagggggacccgagccagatcgcccagtcgtggctgatttgcggccctcccggctcc
gggcgttccaacatggcccgtgcgttcgcggcggcgctggaaagccccgaccatggcatg
agcgatgagcccacgcgcgtcacacagcaggtactcgccggcacccacccggatgtcaca
gtgctggccaccaacaaagtgaccatcggcatcgaccaggtgcgcgagatcatcaccacc
tccgagcaaatgccggccacagcaccatggcgcatcatcgtcattgaggatgtggaccgc
atgctggagcgcaccaccaacgtgctgctgaaggagatcgaagagccggccgaacactgc
atctggctgctatgcgcgccgagcgcccaggacgtgctgcccaccatccgctcgcgcacg
cgcattgtgaatctcgccgtgccctccgcctcggcagtggccggattcctgactgccacc
acgggcgtcgagccgaaagtcgcccagcgggcggcccgtctggccgagggacacatcggc
atcgccaagttgtacgccactgacgagcaggtgatgacggatcgcgacgaattggtggtg
ggcgtactgaacctcgctcgcgcctcggacgcggtgctgctggccggcaacctcatcgac
aatgccaaggcccaggccgaggtggacgcaagccgcaccgcggccgatcaagaggcggaa
tttcgccgtatcaacggtcttgagccgggggagcggattccgccgaaactgcgcggcgcg
ttcaatcagatcgccaagaaggacgatctcaagcggctgaccacacgacgcacgcgcgat
gtgctggaccgcgcgctcaactccatcgcctccatttaccgtgatgtggcggtcctgcag
aacaatgcggaggattcggtcgggcttatcaacctggagaatcggtcggccatcaccgag
ctgtccgtgcggctgaaccgcgccggcgcggtggcccgactagacgaagtggctcacgcc
cgcaagcgacttgccggtaatggcaacccgctgctggtgtttgaatcgctcttttgcgcg
ttgattccgtga
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