Bifidobacterium breve JCM 7019: B7019_0334
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Entry
B7019_0334 CDS
T03121
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bbrc
Bifidobacterium breve JCM 7019
Pathway
bbrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B7019_0334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbrc03019
]
B7019_0334
03016 Transfer RNA biogenesis [BR:
bbrc03016
]
B7019_0334
Enzymes [BR:
bbrc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
B7019_0334
Messenger RNA biogenesis [BR:
bbrc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B7019_0334
Transfer RNA biogenesis [BR:
bbrc03016
]
Prokaryotic type
tRNA degradation factors
B7019_0334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH_2
PCB_OB
DUF1773
S1_2
Motif
Other DBs
NCBI-ProteinID:
AHJ18655
UniProt:
W6EV05
LinkDB
All DBs
Position
405286..407997
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AA seq
903 aa
AA seq
DB search
MEGPEIKAVEAVIDNGTFGKRTLRFETGRLAQQADGAVAAYLDDDSMILSTTTAGSSPKE
NYDFFPLTVDVEEKMYAAGKIPGSFFRREGRPSSEAILACRIIDRPLRPLFPHTLRNEVQ
VVETVLAVNPDDAYDVIALNAASASTMISGLPFEGPVSGVRLALIDGQWVAFPRWSERER
AVFEIVVAGRVVENGDVAIAMIEAGAGKNAWHLIYDEGQTKPDEEVVAAGLEAAKPFIKV
ICEAQDELKKIAAKETKEFQLFPEYTDELYARIDDIAHKDLDEALSIAEKLPRQDRIHEI
KEHVREVLADEFTDMDDAEKDKELGNAFKELQRQIVRRRILTEDYRIDGRGLRDIRTLSA
EVDIVPRVHGSALFQRGETQILGVTTLNMLKMEQQIDALSGPQSKRYMHNYEMPPYSTGE
TGRVGSPKRREIGHGALAEKALVPVLPSREEFPYAIRQVSEAIGSNGSTSMGSVCASTLS
LLAAGVPLKAPVAGIAMGLVSGDVEGQHIFKTLTDILGAEDAFGDMDFKVAGTSEFITAL
QLDTKLDGIPADILAAALQQAKEARATILEVINECIDGPAEMSEFAPRIITTTVPVEKIG
EVIGPKGKMINQIQEDTGAEIAIEDDGTVFISSEGGEAAEKAKSIIDSIANPHVPEAGET
YNGKVVKTTSFGAFVNLTPGTDGLLHISQIRNLANGERIDAVEDVLKEGDTVEVVVQGVD
DRGKISLAIPGFEDQENNAGSRGGRGDRDDRRGSRGRDDRRGGGRGRHSDRDDRDFDDRD
DRPRRRRSDDFEDDYEDRPRRRRSDDRDFDRDDRDSRDDDRPRRRRSDDFEDDYEDRPRR
RRSDDRGDRDDRRGGSRGGRGRGSDRNPRYATDDNYDDYRADREERSERPRRRVRRDFDP
FED
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcccgaaatcaaggccgttgaggccgtaatcgacaatggaacgtttggcaag
cgcacgctgcgcttcgagaccggccgcctggcacagcaggctgatggtgctgtggccgcc
tacctcgatgacgattccatgattctgtccaccaccaccgccggctccagcccgaaggag
aactacgacttcttcccgctgaccgtcgacgttgaagagaagatgtacgccgccggcaag
atcccgggctcgttcttccgccgtgaaggccgtccgagctccgaggccatcctcgcctgc
cgcatcatcgaccgtccgctgcgcccgctgtttccgcacacgctgcgcaacgaggtgcag
gtcgtcgagaccgtgctcgccgtgaaccctgatgacgcctacgacgtcatcgccctgaac
gccgcctccgcctccaccatgatttccggtctgccgttcgaaggcccggtctccggtgtg
cgtctggccctgatcgacggccagtgggtcgccttcccgcgctggagcgagcgtgagcgc
gccgtgttcgagattgtggtcgccggccgcgttgtcgagaacggtgacgtcgccatcgcc
atgatcgaggccggcgccggcaagaacgcctggcacctcatctacgacgagggccagacc
aagcctgatgaggaagtcgtggccgccggtcttgaggccgccaagccgttcatcaaggtg
atttgcgaggctcaggacgagctcaagaagatcgccgccaaggagaccaaggaattccag
ctcttcccggagtacaccgatgagctgtacgcccgcatcgacgatatcgctcacaaggat
ctggacgaggccctctccatcgccgagaagctgccgcgccaggaccgcatccacgagatc
aaggagcacgtgcgcgaggtgctcgcggacgagttcaccgatatggacgatgccgagaag
gacaaggaactcggtaacgccttcaaggagctgcagcgccagatcgtgcgtcgccgcatc
ctgaccgaggactaccgcatcgacggccgtggcctacgcgacatccgcaccctgtccgcc
gaggtggacattgtgcctcgcgtgcacggttccgccctgttccagcgtggcgagacccag
attctgggcgtcaccaccctgaacatgctcaagatggagcagcagatcgacgctctgtcc
ggtccgcagtccaagcgctacatgcacaactacgagatgccgccgtactccactggtgag
accggtcgcgtcggctccccgaagcgccgcgaaatcggccacggtgccctcgccgagaag
gctctcgtgccggtgctgccgagccgcgaagagttcccctacgccatccgccaggtctcc
gaggccatcggttccaacggttccacttccatgggttccgtctgcgcctccaccctgtcc
ctgcttgccgccggcgtgccgctgaaggctccggttgccggcatcgccatgggccttgtg
tccggcgatgttgagggccagcacatcttcaagaccctcaccgatatcctgggcgccgag
gatgccttcggtgacatggacttcaaggtggcgggtacttccgagttcatcactgccctg
cagctcgacaccaagctcgacggcatccccgccgatatcctggccgccgctctgcagcag
gccaaggaagctcgcgccacgattctcgaggtcattaacgaatgcatcgatggcccggct
gagatgagcgagttcgctccgcgcatcatcaccaccaccgttccggttgagaagatcggc
gaggtcatcggcccgaagggcaagatgatcaaccagattcaggaagacaccggtgctgag
atcgccattgaggatgacggtaccgtcttcatctcctccgaaggtggcgaggctgccgag
aaggccaagtccatcatcgactccatcgccaacccgcacgtgcctgaggccggcgagacc
tacaacggcaaggtcgtcaagaccacgagcttcggtgctttcgtgaacctcactcctggc
accgacggtctgctgcacatctcccagattcgcaacctggccaacggcgagcgtatcgac
gccgttgaggacgtgcttaaggaaggcgacaccgttgaggtcgtcgtgcagggcgttgac
gatcgcggcaagatttccctggccatccccggtttcgaggatcaggagaacaacgccggt
tcccgtggtggccgtggcgatcgtgatgatcgccgtggtagccgtggccgtgatgatcgc
cgtggcggtggccgtggccgtcactccgaccgtgacgatcgcgacttcgacgatcgcgac
gaccgtccgcgtcgccgtcgctccgacgatttcgaggatgactacgaggatcgtccgcgt
cgccgtcgttccgatgaccgcgacttcgaccgtgacgaccgcgattcccgcgatgatgat
cgtccgcgtcgccgtcgttccgacgatttcgaggatgactacgaggatcgtccgcgtcgc
cgtcgttccgatgaccgtggcgatcgtgatgaccgccgtggtggctcccgtggcggccgt
ggccgcggttccgaccgcaacccgcgctacgccaccgacgacaactacgacgactatcgc
gccgaccgcgaagagcgctccgagcgcccgcgccgccgcgttcgccgcgacttcgatccc
ttcgaggactga
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