Bifidobacterium breve JCM 7019: B7019_0624
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Entry
B7019_0624 CDS
T03121
Name
(GenBank) DNA-helicase-II-like protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bbrc
Bifidobacterium breve JCM 7019
Pathway
bbrc03420
Nucleotide excision repair
bbrc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B7019_0624
03430 Mismatch repair
B7019_0624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbrc03400
]
B7019_0624
Enzymes [BR:
bbrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B7019_0624
DNA repair and recombination proteins [BR:
bbrc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B7019_0624
MMR (mismatch excision repair)
Other MMR factors
B7019_0624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AHJ18924
LinkDB
All DBs
Position
762528..764075
Genome browser
AA seq
515 aa
AA seq
DB search
MEQAQQILEGLDEQQRRAATTLNGPVRIIAGAGAGKTRTVTRRIAYACATGAWKPERVLA
VTFSVKAAAEMRARLEQLGLQGGTSGVTAATFHSAALRQLNSVWADVCEAPFPHLIEDQR
DTVSRAITRATAVRDIDALTVRDVLAEINWAKISLVPIDDYARISVEANRQPPAGFDAAR
FAAIYDAYEQEKTSRGEIDFDDILLLVCHIMDDFPEAAAQIRSSIGWLTVDEYQDVSPLQ
HRLLNLWLGGDGPNGKAAMNRNVCVVGDPAQTIYSFAGASSWHLLQFADEFGPLSADINL
NTDYRSTPEVVGLANRVLAAAPNREDYLKLVSAREKGVRISRTAYDTDDLEAQGVAARIA
RLVAQGAKPSDCAILTRINAQQPVFGAALRAARLEFRVRKDSGWQSSSLADDATTRRALL
EAMGLDATGSQQSTDPGVTISTIHAAKGLEFKHVFLIGCSEGLLPYGAPEPGETLEEERR
LMYVGVTRAEDSLHLSYARTKDGYGAQQRRPSRFL
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagcgcagcagattcttgaagggctcgatgagcagcagcgccgagcggcgact
acgctgaatggcccggtgcgcatcatcgccggtgcaggcgcgggcaagacccgtaccgtt
acgcgacgcatcgcctatgcctgcgcgacgggagcatggaagcccgagcgggtgcttgcc
gttacgttttcggtgaaagccgctgccgaaatgcgtgctcgacttgagcagctggggctg
caaggcggtacatccggtgttaccgccgctacttttcactctgcggcattgcgccagctc
aacagtgtgtgggccgacgtctgtgaagcgccattcccgcatctcatcgaagatcagcgt
gacaccgtatctcgtgccatcactcgtgctaccgctgtacgagatattgatgcactgacc
gtgcgcgatgtactggctgaaatcaattgggccaaaatttctctggtacccatcgatgat
tacgcgcgtatcagcgtagaggccaatcgtcagccgcccgcagggttcgatgccgctcga
ttcgccgctatctatgatgcgtatgagcaagagaaaacatcgcgaggagaaatcgatttt
gacgacatcctgctgctggtatgccacatcatggatgattttcccgaagcggcggcgcag
attcgttcctccatcggctggctcaccgttgatgagtatcaggatgtttctccgctgcag
catcgtttgctgaacttatggcttgggggagacgggccgaatggtaaggccgctatgaac
cgcaatgtatgtgtggtcggcgaccctgcacagaccatctactcgttcgcgggtgcatcc
agctggcatctgttgcagttcgccgatgagttcggccctctgtctgcagacatcaacctc
aacaccgactaccgttcgactcctgaagtggtgggtctcgccaatcgggtgcttgccgcg
gcccccaatcgtgaggattatttgaagctggtttccgccagggagaagggggtacgcatc
agccgaacggcctatgacaccgatgacctggaagcacaaggtgtggcggctcgcatcgca
cgacttgttgcgcagggtgcgaagccctccgattgcgcgattctgacgcgcatcaacgcg
cagcagccggttttcggtgcggcattgcgcgcggcaaggctggaattccgcgtgcgtaag
gattccggatggcagtcttcgtcgctcgcggatgatgccacgacacgcagggccctgttg
gaagccatgggattggacgccacaggcagccagcagagcaccgaccccggcgtcacgatt
tccaccatccatgcggccaaaggtctggaattcaaacacgtctttctgatcggctgctcc
gaagggctattgccgtacggggcaccggaaccgggggagacgttggaagaggagcgacgg
cttatgtacgtgggcgtcacacgagccgaggactcgctgcatctgtcatatgcgcggacc
aaggatgggtatggggcgcagcagcgccgcccctcccgcttcttgtga
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