Bifidobacterium breve JCM 7019: B7019_0867
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Entry
B7019_0867 CDS
T03121
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bbrc
Bifidobacterium breve JCM 7019
Pathway
bbrc03420
Nucleotide excision repair
bbrc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B7019_0867
03430 Mismatch repair
B7019_0867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbrc03400
]
B7019_0867
Enzymes [BR:
bbrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B7019_0867
DNA repair and recombination proteins [BR:
bbrc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B7019_0867
MMR (mismatch excision repair)
Other MMR factors
B7019_0867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AHJ19149
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All DBs
Position
1045431..1048112
Genome browser
AA seq
893 aa
AA seq
DB search
MYDEPEVIARSAQELVGDLNPQQAEAVQYRGQALLIGAGAGSGKTRVLTRRIAWILSQFG
AWPSQILAITFTNKAAAEMRERLGSLIGPVAQRMWVSTFHSACVRILRRDGKSIGLKSGF
SIYDSADSERLVKIIATEFNLDIKRYTPRSILGHISDLKNNLTGWKENLAVHAPDFTPGQ
RGYQFGTVGDLEAIYAVIYAEYEHRLALANAVDFDDLIGRTVELLRTDPAVAEYYHHRFR
YILVDEYQDTNHAQYVLVRELAGVDTGEEAIPGAPNAGKAGPAWITVVGDSDQSIYAFRG
ADIRNIQDFEQDFPNAKTIMLEQNYRSTQTILDAANAVISNNEGRKPKKLWTALGKGEPI
VGYAADNAQQEAQWVATEIARLHAEEDIAYSDMAIMYRANAQSRSLEEALINAGLPYQLV
GGTKFYERREIKDALAYLQALVNPDDDVNLRRILNVPKRGLGDRAEGILLAYARERGTSF
FYALMHLDEIQDVPTRTATQLKAFRDLMGELSQFTRAHDAKPSEIVAEVLEKSGLRAELE
KSVDPQDASRLENLSQLQSTAAEFEQNTPDATLSAFLETTALVADSDQLPGEAEDSGKVT
LMTLHTAKGLEYPVVFLTGMEQGTFPHSRSMEDTTELQEERRLAYVGITRAKQRLYVTRA
AVRSQWGQAADMMPSQFLDEIPDSLIDWKRRKAGMERMRANWESDGFDDEFGGWDDDDFG
GTTFGGSSTFGSRGSGSSYGSRSHYGSSSYGSGSSYGSRSGGSSYGSRSGSSYGSRSRSG
SSYGSGSGSSYGSRSRSRSSSASGGTRGGKVTTRHTTPKSGSAGSSMPSSKLAKDNGLNI
SDFAVGDMISHDQYGLGKVTDAQDKGRNSVITVDFGSAGVKRLMLRVAPIEKL
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
gtgtacgacgagccggaagtcatcgcccgcagcgcgcaggaactcgtaggcgacctgaac
ccgcagcaggccgaagccgtgcaataccgcggccaggcgctactgatcggagccggcgcc
ggttccggcaaaacccgagtcctcacccgacgcatcgcatggatcctgagccagttcggc
gcatggcccagccagattctggccatcaccttcaccaacaaggccgccgccgagatgcgt
gaacgactcggctcgctgattggcccggtggcccagcgtatgtgggtctccaccttccac
tccgcctgcgtgcgcatcctgcgccgcgacggcaaatccatcggcctcaaatccggcttc
tccatctacgattccgccgactccgagcgactcgtcaagatcatcgccaccgaattcaac
ctcgatatcaagcgctacacgccgcgctccatcctcggccacatctccgacctgaaaaac
aacctgaccggctggaaggaaaacctcgccgtccatgcgcccgacttcacgcccggccag
cgcggctaccagttcggcacggtgggtgaccttgaagccatctacgcggtgatatacgcc
gaatacgagcacaggctcgccctggccaacgccgtcgacttcgatgatctgattgggcgc
acggtcgaactgctgcgcaccgacccggccgtcgccgagtactaccatcaccgtttccgt
tacattctggtcgacgagtatcaggacaccaaccacgcccagtatgtgctcgtacgcgag
ctggccggcgtggacacaggggaggaggccattccgggcgcgccgaacgccggcaaggcg
ggccctgcttggatcaccgtcgtgggcgattccgaccagtccatctatgccttccgcggc
gccgacatccgcaacatccaggatttcgaacaggacttcccgaacgccaagaccatcatg
ctcgaacagaactatcgttcgacgcagaccattttggacgcggccaacgcggtgatcagc
aacaacgagggacgcaagcccaagaaactgtggacagcactcggcaaaggcgagccaatc
gtcggctacgcggcggataacgcccagcaggaggcccagtgggtggccaccgaaatcgcc
cgactgcacgccgaagaagatatcgcctactctgacatggcgattatgtatcgcgccaac
gcgcagtcccgctcgctcgaagaggcgttaatcaacgcagggctgccgtaccagctcgtc
ggcggcaccaagttctacgaacgccgtgagatcaaggacgcgctggcctatttgcaggcg
ctggtcaacccggatgatgacgtgaacctgcgtcgaattttgaacgtgcccaagcgcggg
ctcggcgatcgtgccgagggcatcctgctcgcctatgcgcgcgaacgtggcaccagcttc
ttctatgcactcatgcatttggatgaaattcaggacgtgcccacacgtaccgccacgcag
ctcaaggccttccgtgatttgatgggtgagctctcgcaattcacgcgagcacatgacgcc
aagcccagcgagattgtggccgaagtgctggagaagtccggcttgcgtgcagagctggaa
aagtccgtggacccgcaggacgcctcccgtttggaaaacctctcccagctgcagtccacc
gcagccgagttcgagcagaacacgcccgacgccacgctatccgcattcctggagaccacc
gcgctcgtggccgattccgaccagctgcccggcgaggcggaggattccggcaaagtgacg
ctgatgaccttgcacacggccaagggcctcgaatacccggtggtgttcctgaccggcatg
gaacagggcacgttcccgcattcgcgttcgatggaggacaccaccgaactgcaggaggaa
cgccgacttgcctatgtgggcatcacccgcgccaagcagcgcctgtatgtcacgcgcgca
gccgtacgctcccagtgggggcaggccgccgacatgatgcccagccagttcctcgacgag
atccccgattcgctcatcgattggaaacgccgcaaggccggcatggaacgcatgcgcgcc
aactgggaatccgacggcttcgatgacgagttcggtggctgggacgacgacgattttggc
ggtacgacgttcggtgggtcctcgacattcggctctcgcggttcgggttcgtcgtatggc
tcgagatctcattacggctcgtcaagctatggatctggctcgtcctatggctcccgttcg
ggcggttcatcgtatggctcacgttccggctcctcctacggttcccgctcgcgctcgggt
tcgtcctatggttcgggttccggctcttcatatggttctcgttcccgttcccgttccagt
tcggcgtccggcggcactcgtggcggcaaggtcactacgcgccacaccacgccgaagtcc
ggttccgccggatcttccatgccaagttccaagctcgctaaagataatggactgaatatc
tctgactttgccgtgggcgacatgatcagccacgaccagtacggtctcggcaaagtcacc
gacgcgcaggacaagggccgcaattcggtcatcaccgtggacttcggctccgccggagtc
aaacgccttatgctccgcgtggcaccgatcgaaaagctgtga
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