Bifidobacterium breve JCM 7019: B7019_1556
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Entry
B7019_1556 CDS
T03121
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bbrc
Bifidobacterium breve JCM 7019
Pathway
bbrc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B7019_1556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbrc03400
]
B7019_1556
Enzymes [BR:
bbrc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
B7019_1556
DNA repair and recombination proteins [BR:
bbrc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B7019_1556
Prokaryotic type
B7019_1556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
AHJ19737
LinkDB
All DBs
Position
1683023..1683712
Genome browser
AA seq
229 aa
AA seq
DB search
MIKPLRELVEPGWANALADVEPTIHRMGAFLREENAAGRPWLPASHNILRAFTIPFDSIK
VLIVGQDPYPTPGHPVGLSFCVAPEVRPLPKSLINIYKELVDDLGVPMPPNGDLTAWTER
GVMLLNRCLTVGVGRPNSHQGKGWEEVTEAAIRALNARVDGNGKPRPLVAILWGRNAQSL
EPLLTNAFIIKSPHPSPLSASRGFFGSKPFSRANQALINMGAEPVDWSL
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaccattgagagaactggtagagcccggatgggcaaacgcactggccgatgtt
gagccgaccatccaccgcatgggcgctttcctccgggaggagaacgccgcaggcagaccc
tggctgccggccagccacaatattctcagggcctttaccattccgtttgattcgatcaag
gtactgatcgtgggccaagacccctaccccactcccgggcatccggtgggactgagcttc
tgcgtggcaccggaggtacgaccactgccgaagagcctgattaatatctataaggaactg
gtcgacgatctaggcgtgccgatgcccccgaacggagacctgacagcatggaccgagcgc
ggggtcatgttgctgaacaggtgcttgaccgtgggagtcggacgccccaactcccatcag
ggcaaaggctgggaagaagtcaccgaagccgctatccgagcattaaacgcacgcgtggac
ggcaacggcaaaccgaggcccttggtggctattctatggggacgcaacgcgcagagtctg
gaaccgctgctcaccaacgcctttattattaagtcacctcatccgagcccgctttccgca
tcccgaggtttcttcggctccaaacctttctctcgagctaatcaggcccttatcaacatg
ggtgccgagcccgtggattggagtctgtaa
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