KEGG   Bifidobacterium breve JCM 7019: B7019_1596
Entry
B7019_1596        CDS       T03121                                 
Name
(GenBank) CRISPR-associated protein, Csd1 famil
  KO
K19117  CRISPR-associated protein Csd1
Organism
bbrc  Bifidobacterium breve JCM 7019
Brite
KEGG Orthology (KO) [BR:bbrc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:bbrc02048]
    B7019_1596
Prokaryotic defense system [BR:bbrc02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    B7019_1596
SSDB
Motif
Pfam: Cas_Csd1
Other DBs
NCBI-ProteinID: AHJ19773
LinkDB
Position
complement(1726180..1727946)
AA seq 588 aa
MIIGDLCDAYAVLVSQNKAPAHGYDNTNVPYGLVVDDDGTLIRVRPLGDFSGKKPVNIIP
VPARFPRSSGIVANFLCDNVTYLLGCDTKGNAKRAAQAFQACGELHRRILDGVKDRAASA
VCAFFSKAPQWQTAQRLMGYEAWKSSVTMNFALEYDDGGRTIFIGELPSIREAWDAYYGR
VDDADESALVSSLVSGERIAPEKVHPKIKGVAGAQSSGASLISFNAPAFCSHGAEQNENA
PMSKREAYEYTTALNTLLADRDRVQRIGGDTVVSWANCGDNAYRDVWDQYMGQSGGLSEK
VVVDATRALAQGKPYDYEGIHLSPDEQFHILALSPNAARLSVRFYLTDTFGAFARNIDRH
YRDTAIRRPVYDSTTSLPTWRLLNQTIRTQSKTAKVSPQMAGAVMKAILEDTPYPMTLIN
AVERRINAEHDISPDKAAIIKAYYLRATTNAQFKEVLQMDINEESDYLPYVLGRMFSIYE
QIQSAAIPGINTTIKDKYFTSASTTPARIFPILGDLAAKHMRKTWKSEGLKVKLDKALGE
LTGRVGDRYPSRLSLEERGAFQLGYYFENQKRFDKANKNNNEQEENND
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgatcatcggcgatttgtgcgatgcgtacgccgtcctggtgtctcagaataaagctccg
gcccatgggtatgacaacaccaacgtcccatacgggttggttgtcgacgatgacggtacc
ttgatccgagtccgaccattgggggacttcagcgggaagaagcccgtcaacatcattccg
gtgccggctcgtttcccccgttcatcagggattgtggcgaacttcctctgcgacaacgtc
acgtacctgctcggctgtgacaccaaagggaacgccaagcgtgcggcgcaggcgttccaa
gcgtgcggcgaattgcatcgacgcatactcgatggcgtcaaggaccgtgccgcctccgcc
gtatgcgccttcttctcgaaggcgccacaatggcagaccgcccaacgacttatggggtac
gaggcatggaaatcatcggtgacgatgaacttcgccctggaatatgacgatggagggcgg
acgatattcatcggagaacttccgagcatacgagaagcctgggatgcctattacgggcgg
gtggacgatgccgatgaatcggcactggtctcaagcctggtttccggcgaacgcatcgct
ccggaaaaggtccatcccaagatcaaaggtgtcgcgggagcccaatcatcaggtgcgtca
ttgatatcattcaacgccccggcattctgctcgcatggcgccgagcaaaatgagaacgct
ccgatgagcaagcgggaggcctatgaatatacaacggcgttgaacaccctgctcgccgac
cgtgatcgggtccaacgcattggaggcgataccgtcgtatcatgggccaattgtggcgat
aacgcatatcgtgacgtgtgggatcagtatatggggcaatccggcggactgagtgaaaaa
gtggtcgtggatgccacgcgtgcgctggcgcagggaaaaccttacgactacgagggaatt
cacctcagcccggatgaacaattccatattctcgcgctgtcccccaatgcggcacgtctt
tcggttcggttctacctgaccgatacgttcggggcgttcgcgcgcaacatcgatcggcat
tatcgagataccgccatccgacgccccgtctacgattcgacgacctccctgcccacatgg
agattgttgaatcagaccatacgaacacaaagcaaaaccgcgaaagtgtcaccgcaaatg
gcgggtgccgtcatgaaagcgatacttgaagacacgccgtatccgatgactctgatcaac
gcggtggagcgtcggatcaatgccgaacatgatatctcgccggataaggcggcgatcatc
aaagcgtattacctacgcgcaacaaccaatgcacaattcaaggaggtgctacagatggac
atcaatgaagagagcgactacctgccgtatgtgctcggccgcatgttctccatctacgag
cagattcagtcggccgccatacccggcatcaataccacgatcaaggacaagtatttcacc
agcgcatccacgactccggcccgcatcttcccgattctgggagatctcgcggcgaagcac
atgcggaaaacctggaagtcggaaggacttaaagtcaagttggacaaagccctgggcgag
ctgaccgggagagtgggggaccgttatccctcccgtctttccctggaagaacgcggcgca
ttccaactcggatattatttcgaaaatcagaaacgattcgacaaagccaacaagaacaac
aacgaacaggaagagaacaatgactga

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